Panicum hallii (Hall's panicgrass): 112882274
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Entry
112882274 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112882274 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112882274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112882274
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112882274
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112882274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
112882274
NCBI-ProteinID:
XP_025803072
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Position
2:complement(15337203..15341703)
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AA seq
299 aa
AA seq
DB search
MYCRECIRFHHCLPADTNVLSRIFAQMNFKCDCKKYIPYFEFLEHRRDCPSAKYSTPPAR
WKCMLKTSLLQCSECEAPIRPPIFLLWSNNLICSACYRGDISTYGYRHCTELEYLLRAIK
VKCIACKQYFPFSWLGSRQVGDCPFKCELQNIAPGSSAPKKLCDEEETERPMAGNNSIHG
KSKRKVHFDVGKMGKHIFHGDEVASDDDSYDASYDDNHPECGMRVAENAFNTHASNKKVK
IATPYGQKIAQAPSKPPLQLLPRRLVTRSRKRGNFYFLLVIKSYYPSTPQHELVSKFGL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtcgtgaatgtatccgcttccaccattgcctgcctgctgataccaatgtgctg
agccgcatcttcgctcagatgaacttcaaatgcgactgcaaaaaatacattccttacttc
gagtttctggaacaccggcgtgactgcccgtctgccaaatattccactcctcctgcccgg
tggaagtgcatgctgaagacaagtctccttcagtgttctgaatgcgaggctcctatccgg
cctcccattttcttgctttggagtaacaatctcatttgtagcgcctgctaccgtggtgat
atcagcacctacggctacaggcactgtactgagcttgagtacctcctccgagctataaag
gtcaaatgcattgcctgcaaacaatactttccattctcctggttggggtcgcgccaggtg
ggtgattgcccattcaagtgtgaattgcaaaacatcgccccaggctcgagtgccccaaaa
aagttatgtgatgaagaggaaaccgagagacctatggccggcaacaatagtatccatggg
aaaagtaagcgaaaggttcattttgatgttggtaaaatgggcaagcacatttttcacggt
gatgaggttgcgagtgatgatgactcatatgacgcttcatatgatgacaaccatcctgag
tgtggcatgagagtggctgaaaacgcctttaacacacatgcaagtaacaagaaagtaaag
attgcaacgccatatgggcagaaaatagcccaggctccctcgaagccacctctacaactg
ttacctcgtcgcctagtcacccgtagcaggaagaggggtaacttttattttttacttgta
attaaatcatattatccatcaacgccgcagcatgaacttgtttctaaatttggtttataa
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