Panicum hallii (Hall's panicgrass): 112882455
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Entry
112882455 CDS
T07366
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112882455
03036 Chromosome and associated proteins [BR:
phai03036
]
112882455
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112882455
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Helicases
112882455
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112882455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
112882455
NCBI-ProteinID:
XP_025803305
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All DBs
Position
2:47725785..47730328
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AA seq
708 aa
AA seq
DB search
MSPALAAAEPMAVDDSASKKAKRKQLKAAAAAAAEAEAEAASAKKKEKKEKKRKAKEPSP
SSDEEKSSTSSEETAPAAKKVKKEKAKKTVEASPSASEDDGEVTASSDEDSADPNALTNF
RISEPLRQRLKSKGIKALFPIQATTFDLVLDGSDLVGRARTGQGKTLAFVLPILESLVNG
THKASRKTDYGRPPSVLVLLPTRELANQVHADFEFYGATYGLSACSVYGGSPYRPQEMAL
RKGVDIVVGTPGRVKDFIVKGTLNLKCLKFRVLDEADEMLNMGFVDDVELILGKVEDVTK
VQTLLFSATLPDWVNKLSMRFLKGDRKTVDLVGNEKLKASASVKHLALPCNKAARAQVIP
DIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRGGKFQVLV
ATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKHSVSRL
ERESGVKFEHISAPQPTDVAQSAGTEAADAIASVSDSVIPIFREQAEQLLSSSSLSAADL
LAKALAKAVGYTDIKKRSLLSSMEDYTTLHLQTGRPMWSPGFAFTILKRFMPEEKLADVK
GATLTADGTGVVFDVPAADVEDYIQASESAAQVTIDEVKQLPPLQEREQSRGNSGGGRFG
RGGGSRFGGGGGGGGRGGGSRFGGGGRGGGGRGFSGRGGGGNRFNRRN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcgctcgccgccgcggagccgatggccgtcgacgactccgcctccaagaag
gccaagcgcaagcagctcaaggccgccgccgccgccgcggccgaggccgaggcggaggcc
gcttcggcgaagaagaaggagaagaaggagaagaagcggaaggcgaaggagccgtccccg
tcctcggacgaggagaagagcagtaccagctccgaggagacggcccccgccgcgaagaag
gtgaagaaggagaaggcgaagaagactgtcgaggcctcgccttcggcctcggaggacgac
ggcgaggtcacggccagcagcgacgaggactccgcggacccgaacgcgctgaccaacttc
cggatatcggaaccgctgaggcagaggctcaagtccaaggggatcaaggcgctgttcccc
atccaggccaccacattcgacctcgtcctcgacggcagcgacttggtcggccgcgcgcgc
acaggccagggcaaaactttggcttttgtactgcccatattggagtcgttggttaatggg
acacacaaggcatcccgaaaaactgactatggcaggcctccaagtgttttggtcctgcta
ccaacgagagagctggccaatcaggtgcatgcggactttgagttttatggtgcaacatat
gggctttcggcgtgttctgtgtatgggggttctccttatcgtcctcaagaaatggcattg
agaaagggggtggacattgttgttggaactcctggtcgtgtcaaggatttcattgtaaaa
ggaactctcaatttgaagtgtttgaaattccgtgtcctcgatgaagctgatgagatgctt
aacatgggattcgttgatgacgtagagctcattcttggtaaggttgaagatgttaccaaa
gtacaaacacttctgttcagtgccactctgccagattgggttaataagctctccatgaga
ttcctgaaaggtgacaggaagacagttgatcttgtcggcaatgagaaactgaaggctagt
gcatctgtcaagcatcttgctcttccttgtaacaaggcagcaagggctcaagttattccg
gatattatccgatgctatagccatggaggccgaaccattatcttcaccgagacaaaggac
tctgcatcagagctttctggtttgatccctggatcccgtgccttgcatggagatgttgtg
caagctcagcgtgaagtcattcttgctggattccggggtgggaaattccaagttttggtt
gctacaaatgtggcagctcgtggtctggacattaatgatgtgcaacttatcattcagtgt
gaacctccacgtgatgttgaagcttacatacaccggtcagggcggacagggagagcaggg
aacactggtgttgctgtcatgctttacgagcccagatataagcacagtgtgagcagatta
gaaagagagtcaggagttaagtttgaacatatctccgcgccacagcctactgatgtggca
caatctgctggcactgaagctgcagatgctattgcgagtgtgtcagacagtgttatccct
atttttcgggagcaagcagagcaactgctaagctcttctagtctgtctgcagctgactta
ctggcgaaagcactggcaaaggcagttggatacactgacataaagaaaagatcattgctc
tcttctatggaggattacactacattacatcttcaaactggcagacctatgtggtcacca
gggtttgcttttactatattgaaaaggtttatgcctgaagagaagcttgcagatgtaaag
ggtgctaccctaacagctgatggaacaggggttgtatttgatgttcctgcagcagatgtt
gaggactacattcaagcttctgagagtgctgctcaggtgacaattgatgaagtgaagcag
ctgccacccttgcaagagagagagcagtcaagaggcaactctggcggtggaagatttggc
cgtggaggtggaagcagattcggtggcggtggcggtggcggtggccgtggaggcggcagc
aggtttggtggtggaggcagaggtggaggcggcagaggcttttctggcaggggaggcggt
ggcaataggtttaacaggaggaattag
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