Panicum hallii (Hall's panicgrass): 112882762
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Entry
112882762 CDS
T07366
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112882762
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
112882762
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
112882762
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Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
112882762
NCBI-ProteinID:
XP_025803679
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Position
2:complement(48305425..48310914)
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AA seq
611 aa
AA seq
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MVKIVTYNVNGLRPRVVQHGSLRRLLDALDADIICFQETKLSRQDLSADVIMAEGYEAFV
SCNRSAKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQDYAKNSEIVGDFVIAT
PVEEEGLGEITREDLIKVDNEGRCIITDHGHFVLFNIYGPAVEADDKERVRFKLLFYKIL
QKRWEHLLALGKRVFVVGDLNIAPASIDRCDAPPGFEKQMFREWLRSMLREHGGPFFDAF
RSKHPERAGAYTCFNQKIGAEEYNYGSRIDHILISGACLHHCDSAEDHSIFCCHVEECEI
MNHFKRGNSENLSKWKGGRSIKLEGSDHIPVYILLKEIPELPVHNIPPSAARYLPEVRGR
QQSIVSFFNKGKTYELQDAGRLVLSEDTLNDSYCSDGLENKTIAKVGLADAKGGNLPSLI
CKGGDLDQWRNEGLSGISYNRQKNSPSGTKGVPNKKIKRNLSSQPTIKSFFQPPRSETVN
VSTSTLVTPVETVHCMNQTCVPNDDSLPESMQCTTSGAKDQDNTNVSSCSLSTDKCNAAA
LEWQRIQQKMKMTLPRCKGHREPCIPRSVKKGPNIGRLFYVCPRAQGPASNPEANCGHFQ
WAPVKSKEKRS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcgggtggtgcagcacggc
tcgctccgccgcctcctcgacgccctcgacgccgacatcatctgcttccaggagaccaaa
ttgtcaagacaggacctgtcagcagatgtcataatggctgaaggatacgaggcttttgtt
tcatgcaatcgctctgctaaagggcgtggagcatactctggtgttgcaacattttgtcga
gtaacatcagcattttccagccaggaggttgctttgccagtagcagccgaagaaggattt
actggacttcaggactatgcaaaaaacagcgaaattgttggggattttgttattgcaact
cctgtagaggaggagggccttggtgaaatcacaagagaggaccttataaaggtggacaat
gaggggcggtgcatcatcaccgatcacggacattttgtgcttttcaacatatatggccca
gctgttgaagcagatgataaagagcgggttcgttttaagctactattttataagatactg
cagaaacgatgggaacatctattggctcttggaaagagagtctttgttgttggtgatttg
aatattgctcctgcttcaatagataggtgtgatgcgccgcctggttttgagaaacaaatg
ttccgagaatggctgagatccatgctgagagaacatggaggtcccttttttgatgctttt
cgatcaaaacaccctgaaagggcaggagcatatacttgctttaatcaaaaaattggtgct
gaagaatataattatggttctagaatagaccacattctcatttccggtgcctgtctccat
cattgcgattctgcggaggatcatagcattttctgttgccatgtagaagaatgtgagata
atgaatcatttcaaaagagggaattctgaaaatttgtcaaagtggaaagggggaagaagt
attaagctagaaggatctgatcatattccagtttatattttgctgaaagaaattcctgaa
cttccagttcataatatcccaccatcagctgcaagatatcttccagaggtccgtggacgg
caacagagtattgtgtcattcttcaataaagggaaaacttatgagctgcaggatgctgga
cgtttggttctgtcagaggatacattaaatgatagctactgtagtgatggcttggaaaat
aaaactatagctaaggtgggactggcagatgcaaaaggtggtaaccttcctagtttgata
tgtaaggggggagatcttgatcaatggagaaatgaaggtttgagtggcatctcctataac
cgccagaaaaattcaccatctggcaccaagggtgtgccaaacaagaagattaaacgcaac
ttatcctctcaaccaacaatcaagtccttttttcaaccaccaaggtcagagacagtaaat
gtcagtaccagtaccttagttactccagtggaaacagtacattgtatgaatcaaacatgt
gttccaaatgatgatagtctgccagaaagcatgcagtgcacaacttcaggcgccaaagat
caggataacacaaatgtatcatcctgttcactttcaacagacaagtgtaatgctgcagca
ttagagtggcaaagaatacaacaaaagatgaagatgacactgccacgttgcaaagggcac
cgtgaaccatgtattccaagatccgtgaagaagggccctaatattggccgattattctat
gtctgtcctcgtgctcagggacctgcatcaaatccagaagcgaactgcggccactttcag
tgggcacctgtaaaatctaaagagaaacgttcgtga
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