Panicum hallii (Hall's panicgrass): 112882929
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Entry
112882929 CDS
T07366
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112882929
Membrane trafficking [BR:
phai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112882929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
112882929
NCBI-ProteinID:
XP_025803915
LinkDB
All DBs
Position
1:405538..411719
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AA seq
1507 aa
AA seq
DB search
MASSFGPDDQADADFFDKLVDDDDAPASAPANSALARDVSDISLADDDPPTLPPAPEAAP
PEGGSPGSTKAGAGVHTTVKQVQWASFGGGPDDGADPFAELSGGAGDDSFFGTQTPETSE
GTSDHDLFGGNQSLAAPVTDQDFFGGTSSSNQNVDGQLERTGSGAVDSTDPKYLEAMYPG
WKYDEATQQWYQVDTFNTIGNAAQLVDNSSQNLQQQLDASYLQNSAHAGLETIAEEGTAT
AGVSSWGQGGASEYPPNMFFYAEYPGWYFDTNTQQWHSLESYQQAAMQAGTANVVQTGAN
DGAVVTSVGTGYNAKQTEDPAVHNPVTQHNSFTNSFAPQSQRQMTAAFGNTMQSESATDN
SLTSSFYGFDQQANAETSSSSTSQQVGFNTAETVTDHYGAHKGFESSLQSGYSSSDSQQS
SYKAVEPSTGYHASYKAFEPAMGRQTSHNVFEQSAGNQGGYKAFEPSMSNQSGYKAFEPS
TGHHSASKGFMPSTGHQTGYKGSEASTVNQASYNEFETSTGYNTSFKIFEPSSAQHAGYM
GSQPSSGHQPNYLGFDTSANHQGYVDVNGAADTQGFVPMQSTYHGQNQASANPQGHLSKS
YLGTENSMNFNQQQFLIANTSNLQFGHSHDGRSSAGRPPHALIAFGFGGKLIVMKETSSM
TTNFNSGNQGNSSGTVSVLNLSEVVFDKVDPSSITNGSTFGYFNALCRQPVPGPLVGGSA
SSKDVHKWLDEMIAWYEPSSTELQRGDTRKLLISLLKILCQHYGKLRSPFGADPQEETDG
PEMAVTKLFSSFKRSSVHMGDYGSTVHCMKNIPSEGQMQAVAQEVQNLLVSGRRKEALQY
AQGGQLWGPAIILALQLGDQFYVDTVKRMAHSHFVSGSPLRTLCLLIAGQPADVFNVENN
VNSDYGTSHQPMEPGPNGMLDDWEENLAIITVNRTKGDDLVITHLGDCLWKEKIEVAAAH
SCYLVAELNIDSYSESARLCLIGADHLKCPRTFASPEAIQRTEVYEYAKVLGNSQYILLP
FQPYKLIYAYMLAEVGKISDSLRYCQASLKVLKASGRAPELEAWKQLFSSLEERIRTHQQ
GGYGTNLAPAKLVGKIFTSLDKSISRMMGTPSAPLPPLPHGSVSDRESHAAPASAKFVNS
QSVMAMSSLMPSASMQSMTEIAENSGGAGRKIAHNRSVSEPDFGRTSKQGAGSDGTQSSA
SGSGSSRFGWLGSTLQKTMGFVSKSHRQAKLGDQNKFYYDEKLKRWVEEGAAVPAEEPPL
PPPPTKPSFQNGMPDHKLNGLMSGSHAPNGVTEWKSSNSSEQGLGMPPIPPSQNQFSARG
RMGVRSRYVDTFNKSGASGAVPSYNKPAAPSVTPPAGAKFFMPTALASDQMVPHQAAEIH
SETIHRDERSASPPAETSFSSPPPSAQFSAPMSSTIHRQSSMDNISTPYQGSGVSSLSSN
SSFSRSRAASWSGTYSEQLSAFASTKSPEGQTMPSPLMPGKPSHSRSNSISSVQLNGLTE
DLHEVEL
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctttggccccgacgaccaggccgacgccgacttcttcgacaagctcgtc
gacgacgacgacgcccccgcctccgcgcccgccaactccgccttggctcgcgacgtctcc
gacatcagcctcgccgacgatgacccacctaccctgccacccgcccccgaggcggcgcct
ccggagggagggtcaccgggctcaaccaaggccggcgccggcgtccacaccaccgtcaag
caggtgcagtgggcctccttcggaggcggcccggatgatggcgctgatccatttgctgag
ctctcgggaggcgccggcgacgacagctttttcgggacccagaccccggagacctccgag
ggcacctcggatcatgacttattcggtgggaatcagagcttggccgctccggtgacggat
caggacttcttcggggggacctccagctccaatcagaatgtggacggccagcttgagagg
accggcagtggtgctgtggattcaacagatcccaagtatctggaggccatgtaccccgga
tggaagtatgatgaggcaacgcagcaatggtaccaggttgatactttcaatacaataggg
aatgcagctcagttggtagacaatagcagtcagaatctacagcagcagcttgacgcatct
tacctgcagaattcagcgcatgcagggcttgagaccattgctgaggagggcactgccaca
gctggtgtctcaagttgggggcaggggggtgcctcagagtacccacccaacatgttcttc
tatgcagaatacccaggttggtactttgataccaacacccagcagtggcactcgcttgag
tcataccagcaggctgccatgcaggctggaacagctaatgtggttcagactggtgcaaac
gatggtgctgttgtgacttctgtaggaacaggctataatgccaaacaaactgaggaccct
gctgtccacaatccggtgacccaacataactcgttcacgaatagtttcgctcctcagagc
caacgacagatgactgctgcgtttggtaacactatgcaatctgaaagtgctacagataat
agcctgaccagtagtttctacggttttgatcaacaagcaaatgctgagactagtagttcc
tctacaagccaacaggttggttttaacacagctgaaactgttacagatcactatggtgca
cacaagggctttgaatcaagccttcagagtggttatagctcctctgacagtcaacaatcc
agttacaaggcggttgaaccttccacaggttatcacgccagttataaagcgtttgaacct
gccatgggtcgccagaccagtcacaatgtgttcgaacagtccgcaggtaatcagggaggt
tacaaggcgtttgaaccttccatgagcaaccagagtggttacaaggcatttgaaccttcc
acaggtcaccatagtgcttccaagggattcatgccttccactggtcaccagactggttac
aagggatccgaagcttccacagttaaccaggccagctacaatgaatttgaaacttctaca
ggttacaataccagtttcaagatatttgagccctcttcagctcaacatgctggttacatg
ggttcccaaccttcttcaggtcatcaaccaaactacttgggatttgacacttctgccaat
caccaaggttatgttgatgtcaatggtgctgcggatactcaaggatttgtcccaatgcaa
agcacataccatggtcagaaccaagcaagcgcaaacccacaagggcacctgtcaaaaagc
tatttgggtacggagaactccatgaactttaatcagcaacaatttctgattgcaaatacc
tcaaacttgcagtttggccactctcatgatgggaggtcatcagctggacgaccaccacat
gccctcattgcttttgggtttggagggaaacttatagttatgaaagaaaccagctcaatg
accacaaactttaacagtggaaatcaggggaactctagtggcacagtgtcagtccttaat
ctatcggaggtggtttttgataaagttgatccttcaagcatcactaatggcagcacattt
ggttacttcaatgctttatgccgtcaacctgtccctggtcctctagttggtggaagtgct
tcatcaaaggatgtgcataagtggcttgatgagatgattgcatggtatgaaccttcctcc
actgaactccagagaggtgatactcgcaagttgcttatttcattgctgaagatactgtgt
cagcactatggaaaacttcgttcaccttttggggctgacccacaagaggagacagatggc
ccagaaatggcagtaactaagctattttcttcatttaagagaagtagtgttcatatgggg
gattatggatcaactgttcactgcatgaaaaatattccctcagaaggtcagatgcaggct
gttgcacaagaggtccaaaatcttctagtttctggaagaagaaaagaggcccttcagtat
gcccagggaggtcaactgtggggacctgcaatcatactggctttacagcttggtgatcag
ttttatgtggatacagtgaagagaatggctcactcccattttgtatctgggtcacctctg
cgaaccctatgccttctcattgctggacagcctgcagatgtttttaatgtagagaacaat
gtcaacagcgactatggtacatcccatcaacctatggagcctggtcctaatggtatgttg
gatgattgggaggagaatttggctattattactgtaaacaggacaaaaggtgatgatcta
gtaatcacccatcttggtgattgcctttggaaagagaaaattgaggttgcagctgctcat
tcatgctatttagttgctgaactaaatattgattcatactcggaaagtgcaaggttatgc
ctcattggcgcagaccacttgaagtgtcctcgaacctttgccagccctgaagccattcag
aggacagaagtatatgaatacgcgaaggtgcttggtaattctcagtatatcctgctaccc
tttcagccatataagctgatatatgcatacatgcttgcggaagtggggaagatttctgat
tctttgaggtattgccaagcatctttgaaggtgctgaaagcctctggccgtgcccctgaa
ttggaggcatggaaacaattgttttcttcgctagaggagaggatacgcactcaccagcag
ggtggatatggcacaaatcttgccccagcaaaactagtggggaaaattttcacctcgctt
gataaatctatatcccgcatgatgggtacaccatctgcaccacttccaccactgccacat
ggatctgttagtgatagggagagccatgctgcgcctgcatctgcaaaatttgtaaatagc
caatcggtaatggccatgtcatcgttaatgccatctgcttcaatgcaatctatgactgag
atagcagagaatagtggcggcgctggcaggaaaattgcacacaacagaagtgtttccgag
ccggactttggtagaacatcaaaacagggtgccggatcagatggcacgcagagcagtgca
tcaggatcgggcagttctcggtttggttggttgggctccacactgcagaagactatggga
ttcgtgtcaaaatcccaccgtcaggcaaaattaggggaccagaacaagttttactatgat
gagaagttgaagcggtgggtagaagaaggtgctgcagttcctgccgaggagcctcctcta
cctccacctccaacaaaaccgtcgttccagaatggtatgccagaccataagttgaatggc
ctcatgagtggaagccatgctcccaatggagtcacagaatggaaatcctcaaattcttcc
gagcaaggtttggggatgccaccaattccacctagccaaaaccagttttctgctcgggga
cgtatgggtgtccggtccagatatgtggacacattcaacaagtctggtgcatctggagca
gtgccatcgtataacaaaccggctgctccttctgtgacaccaccagcaggtgccaagttc
ttcatgccaaccgcacttgcttctgatcagatggtgccacaccaagcagcagagatacac
agtgaaaccatccatcgggacgagcggtcagcctcaccgccagcagaaacatcattttct
tcacccccaccatcggcacaattttcagcaccaatgtcgtcaacaattcatcgtcaatcg
agtatggacaacatctccaccccataccaaggatctggggtgtcatcgttaagcagcaac
agctcattctcaagatcacgagctgcatcctggagcgggacatactctgagcagcttagt
gcttttgcgagcactaaatcacccgagggacagaccatgccgtcaccactcatgcccggg
aaaccgtcgcacagtcgttccaacagcatctcatctgtgcagttgaacggattgacagag
gatcttcatgaggtggagctctga
DBGET
integrated database retrieval system
