Panicum hallii (Hall's panicgrass): 112883044
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Entry
112883044 CDS
T07366
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112883044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112883044
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
112883044
Prokaryotic type
Archaeal type
TFB
112883044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_3
WHD_GDS1
DUF7573
RB_B
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
112883044
NCBI-ProteinID:
XP_025804047
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All DBs
Position
2:48268481..48271908
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AA seq
312 aa
AA seq
DB search
MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL
DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY
AKEEDLKNLCTP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactccttctgcccggactgcaagaagcagacggaggtggcgttcgaccactcg
gcgggggacaccgtgtgcaccgagtgcggcctcgtcctcgaggcgcactccgtcgacgag
acctccgagtggcgcaccttcgccaacgagtccaacgacaacgaccccgtccgtgtcggc
gggcccaccaacccgctcctcaccgacggcggcctctccaccgtcatcgccaagcccaac
ggcgcgcagggcgagttcctctcctcgtcgctcggaaggtggcagaaccgcggctccaac
cccgaccgatccctcatcctcgccttccgcaccatcgccaacatggccgacaggttgggt
cttgtggctactattaaggaccgagccaatgaaatctacaagaaggttgaagatctcaag
tctatcaggggaagaaatcaagatgccatattagctgcttgtctgtatattgcttgtaga
caagaagataggcctagaactgtgaaagaaatatgttcagttgctaatggagccacgaag
aaagaaattggccgagcaaaagaatttatagtgaaacagctggaagttgagatggggcaa
tctatggagatgggaaccattcatgctggagattttctgaggcgtttctgttcaactctt
gggatgaacaatcaagctgttaaagcagcccaggaggcagttcagcgctcagaggagctt
gatataaggaggagccctatctcaatcgcagcagcagtaatttatatgataacccaactc
tcagaggacaaaaagccacttaaagatatttccttggctactggtgtggcagaaggcacc
atcagaaattcatacaaggatctgtatccctatgcttcaaggcttatccctaacacctac
gccaaggaggaagacctaaagaatctctgcacaccttag
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