Panicum hallii (Hall's panicgrass): 112883080
Help
Entry
112883080 CDS
T07366
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112883080
Enzymes [BR:
phai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112883080
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112883080
Prokaryotic type
112883080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
112883080
NCBI-ProteinID:
XP_025804129
LinkDB
All DBs
Position
1:51862719..51865027
Genome browser
AA seq
560 aa
AA seq
DB search
MAAASPPPSPPSAKRPKMSSSSDPEADAEPTSPSAAGADPGQPRRPRYKRRKVAILLGYC
GAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVV
SGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKFCDRRRYLYLLPVFALDPSAH
PDREAVMASMGSGSELTKCLECSERGRKVPGVMGREGKPPSPGESGADAPVEGTVDNHDE
SGSIGAAKCDPTILDGGNTSAHGELGLSSNEKLDLPVSGNGTDSGNAELGSNSVVDAIPS
ADADASIGNEEDKVEATATEEKVQGSNGEEKLPTKSDFSYTDEVKERFNRILKYYVGTHN
FHNFTTRTKAEDPAAKRFIISFAANRVVSLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAV
MRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYCEEA
EEFKVKYIFPHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAGAEAKIGAEVAADAEAK
VGAEVDSIEEVQMPNDNVSE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccgccgccctccccaccctccgccaagcgccccaagatgtcctcc
tcctccgacccggaggccgacgccgagcccacctcgccctccgccgccggcgccgacccc
gggcaaccccgccgccccaggtacaagcgccgcaaggtcgccatcctcctcggctactgc
ggcgccgggtaccagggcatgcagaagaacccgggtgcgcgcaccatcgagggcgacctc
gaggaggcgctctaccaggcgggcgccgtgcccgaggccgaccgcgccgcgccgcgccgg
tacgactgggcgcgcgccgcgcgcaccgacaagggcgtcagcgccgcggcgcaggtggtg
tccggacgcttctacgtcgacccgccgggcttcatcgaccgcctcaacgcccagctcgcg
ccgcagatccgcgcctacggctacgtgcgcgtcaccaactcgttcaacgcgaagaagttc
tgcgaccgacggaggtacctgtacctgctccccgtgttcgcgcttgaccccagcgcgcac
ccggaccgcgaggccgtcatggcgagcatggggagtggaagcgagctgacgaagtgcctg
gagtgttctgagagggggaggaaggtgcctggtgtcatgggccgggaggggaagccaccc
agccccggggagagtggcgctgatgctcccgtggagggaactgtggacaatcatgacgaa
tctggatcgattggggctgcgaaatgtgatccaacaattttggatggtggaaacaccagt
gcccatggggagcttggattgagcagcaacgagaagcttgatttaccagtctctggaaat
ggaactgattctggaaatgctgagctgggatcaaacagtgttgtcgatgctataccttca
gctgatgcagatgcttcaattggcaatgaggaggataaagttgaggccacagctactgaa
gagaaagtgcaaggtagcaatggagaagagaagctgccaaccaagagtgacttctcttac
actgatgaagtgaaagaaaggttcaacaggattctcaagtactatgttggaacccataat
ttccacaacttcaccacaagaactaaggcagaggatcctgcggccaaaaggtttatcatt
tcctttgctgccaatcgtgttgttagcctggatggaattgattttatcaggtgtgaagtt
gttggccagagtttcatgctgcatcagatccggaagatgattggccttgctgtagctgtg
atgaggaactgtgcacctgaatccatttatgatgtcgcctttcgcaaggatgtcaacctt
aatgtgcctactgcacctgaggtcgggctgtacctagatgaatgcatgttcacctcatac
aacaagaaatggaaggattcacatgaagcagtttccatggaaccttattgtgaggaggct
gaagagttcaaggtcaagtatatcttccctcatattgcggcgatggaacacaaagaggga
gctgtggctctgtggttgcactcattgaatcacaggaactatcctgatttccgctacatg
gaaactgctggtgctgaggccaagattggtgctgaagttgctgctgatgcagaggccaag
gttggggctgaagttgatagtattgaagaagtacaaatgccaaacgataatgtaagtgag
taa
DBGET
integrated database retrieval system
