Panicum hallii (Hall's panicgrass): 112883217
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Entry
112883217 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112883217
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112883217
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112883217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_10
zf-rbx1
Zn_ribbon_6
Prok-RING_4
zf-RING_4
zf-RING_6
Sina_RING
zf-Nse
zf-P11
U-box
Motif
Other DBs
NCBI-GeneID:
112883217
NCBI-ProteinID:
XP_025804273
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All DBs
Position
2:complement(46860252..46863085)
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AA seq
188 aa
AA seq
DB search
MSTVSGTARAPRRQSQDGSAGKVVVNLEASSPVVGSSHGVPATVAGAQNSPIDVEAIEDE
VQAISPSRVPPPRRNMRTRRRPVTVVDLEVEGVQEGNKRQRVVHVHCLSQHKGEGSSFQS
NKEVPKEPIFTCPICWNKMEEPSTTSCGHIFCSTCIKQAIKVQKKCPTCRKGLRANSIHR
IYLPSTAS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtcagcggcacagcgcgtgccccgaggagacagtcacaagatgggtcagct
ggtaaagtagtggtgaacttggaagcaagctccccagtggtgggtagctctcatggagta
ccagctactgttgctggcgcacaaaactcgcctattgatgtggaagccattgaagatgaa
gtgcaggcaatatcgccctcacgagtgccccctccaaggaggaacatgagaaccaggagg
cgacctgtaacagtggttgacttggaggtggaaggtgtccaggaagggaacaaacgccag
agggttgtacatgtacattgcctctctcaacataagggagaagggtctagctttcagtca
aataaggaggttcccaaggaaccaatttttacctgcccaatatgttggaataagatggag
gagccctccacaacgtcttgtggccatatcttctgcagcacgtgcatcaagcaagccatc
aaggttcagaagaaatgtccaacgtgcaggaagggcctgagagcaaatagtatccatcgg
atttaccttccaagcactgctagttaa
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