Panicum hallii (Hall's panicgrass): 112883221
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Entry
112883221 CDS
T07366
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00900
Terpenoid backbone biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112883221
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phai01006
]
112883221
Enzymes [BR:
phai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112883221
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112883221
2.5.1.29 geranylgeranyl diphosphate synthase
112883221
Prenyltransferases [BR:
phai01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112883221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
NIT
Motif
Other DBs
NCBI-GeneID:
112883221
NCBI-ProteinID:
XP_025804311
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All DBs
Position
1:complement(51853073..51854547)
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AA seq
342 aa
AA seq
DB search
MALSSIFLPLPMPKLLSSSRSHRLLPVRASSAAPAASASFDLRRYWTSLIADVESELDAA
MPMRPPESIHAAMRYAVLPGAGKEGTAKRAPPVLCVAACELLGAPRSAALPAAAALEMLH
AASLVHDDLPCFDAAPTRRGRPSTHAAFGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPH
AVLLRVMAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACGAML
GGAGPDEEAALRRYGRTIGVLYELVDDIRSASGNGKMRRNASVLRALGMDRALGIVEELK
AQAKTEADRFADKYGDRVLPLYSFVDYAVDRGFELQDAAATP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcttccatcttcctccccctccccatgcccaagctcctctcctcctccaga
tcccaccgcctgctccccgtccgggcgtcctccgccgcgcccgccgcctccgcttctttc
gatctgcgccgctactggacctccctgatcgccgatgtggagtccgagctcgacgccgcg
atgcccatgcgccccccggagagcatccacgccgccatgcgctacgcggtcctcccgggc
gccggcaaggaggggaccgccaagcgggcgccccccgtgctctgcgtcgccgcctgcgag
ctcctcggcgcgccgcgctcggccgcgctcccggccgcggcggccctcgagatgctccac
gcggcgtcgctcgtgcacgacgacctgccctgcttcgacgccgcgcccacgcggcgcggg
cgcccctccacgcacgccgccttcggcaccgacatggccgtcctcgcgggcgacgcgctc
ttcccgctcgcctacacccacgtcatcgcccacaccccgtccccggacccggtcccccac
gccgtcctcctccgcgtcatggcggagctcgcgcgcgccgtcggatccaccggcatggcg
gcgggccagttcctcgatctggccggcgccaccgccctcggcgaggccgaggtcatgcag
gtcctgacgaagaagttcggcgagatggccgagtgctccgcggcctgcggcgccatgctc
ggcggggccgggcccgacgaggaggccgcgctgcggcgctacggccgcaccatcggcgtt
ctgtacgagctcgtcgacgacatccggagcgcgtcagggaacggcaagatgaggaggaac
gccagcgtcctgcgcgcgctgggcatggaccgcgcgctcggcatcgtggaggagctcaag
gcgcaggccaagacggaggccgacaggttcgcggacaagtacggcgaccgggtgctgccc
ctgtacagcttcgtggactatgctgtggacagagggtttgagctccaggatgcagcggca
acgccatag
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