Panicum hallii (Hall's panicgrass): 112883249
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Entry
112883249 CDS
T07366
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112883249
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112883249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
112883249
NCBI-ProteinID:
XP_025804307
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All DBs
Position
1:55194802..55207702
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AA seq
1627 aa
AA seq
DB search
MDGGHGLRQPMSPAISASAVVPQQRQMQLHHHPARPAIADLFTLYLGINSKQRPEDPSRE
SSNKLQKRVTALNRDLPPRDEQFISDYEQLRMQFPDQEQLQAVTESVLISFVLQCSSHAP
QSEFLLFATRCLCARGHLRWDSLLPSLLNAVSSIEAPVGQGVPVTSGGPVTPSSSAITMP
NAPNFHPSNPASPLSVMNTIGSPTQSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSR
RGAEISYLHHLSCRILLAGLESNLKPATHAVIFQHMVNWLVNWDQRPHNMDEADAMQTWR
LEKPLHEWMHLCLDVIWILVNEEKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRR
DMVCMHMQMLDQHLHCPTFATHRFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDL
ANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMI
GEAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSNQQ
VLRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKTLDANNIGPQSILLD
FISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFTNLDERATGM
FWVLSFTMAQPACEAIMNWFTSAGMADLIQGPNMQPNERIMMMRETYPLSMSLLSGLSIN
LCLKLAFQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGV
SLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSL
KDFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHT
WSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLS
HSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQFEV
QRGHLAQDLLSKAITNLSFMQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYAL
RLVISLLEKPELQQRVKAFCSSRSPEHWLKNQHPKRVELQKALGNHLSWKDRYPPFFDDI
AARLLPVIPLIIYRLIENDATDIADRVLAFYSSLLAFHPLRFTFVRDILAYFYGHLPIKL
IGRILNLLGVSTKTPFSESFAKYLVSSNSSVCPPPEYFANLLLNLVNNVIPPLSSKSKSN
PADTTRSTFNKHHASSQPGGIGNNDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVSAAQ
IVSSLVQIIAHVQAMLIQSNSGQGMSGGLGQSSGLPTSPSGGGAEPAGSNQTNSAASGIN
ATNFVSRSGYSSQQLSVFMIQACGLLLAQLPPEFHMQLYSEAARVIKDCWWLADSSRPVK
ELDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSV
AMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQVSNPVDASEITDIIDF
LHHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKTDPNCSIYAATHP
KLVQNTS
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggacggggggcacgggctgaggcagccgatgtctccggcgatctcggcctcggcggtg
gtgccgcagcagcggcagatgcagcttcaccaccacccggcgcggccggcaatcgccgat
ctcttcaccctatacctcggcataaactcgaagcagcgaccggaggatccatcgagagag
agctcgaacaagctgcagaagagagtgactgctctgaacagagatctgcctccccgtgat
gagcagttcatttcagattatgagcagctgcgcatgcagttccctgaccaggaacagttg
caagcggtcacagaatcagttctgatctcctttgtgctgcagtgcagtagccatgcacca
caatctgagtttttgctctttgctacacggtgcttatgtgctcgaggccaccttaggtgg
gacagcctccttccatctctgcttaatgctgtttcctccatagaggcgcctgtggggcaa
ggagttcctgtgaccagtggtggtcctgtaacgccttcttcatcagctattacaatgcca
aatgctccaaactttcatccttcaaacccagcttcacctttgtcagtaatgaacaccata
ggatcccctactcaatctggtattgaccaaccagtaggtgcaaatgtgtcaccaattaag
gcagctgaattctccagctcagctcagcttggtacagcagcaagaggtgaccagtctcgc
aggggagcagaaattagctatctgcatcatctgtcctgtaggatacttttggcagggctg
gagtccaatttgaagccagctacccatgccgtgattttccagcatatggtaaattggctg
gttaactgggaccagaggccacacaacatggatgaagctgatgcaatgcaaacttggagg
ctggaaaaacctttacatgaatggatgcatctatgcttggatgttatatggattttagtt
aatgaagagaaatgccggattcctttctatgagcttgttcgctgcaacttgcagtttctc
gaaaacattcctgatgatgaagcattagtcagtataatcatggagatccacaggaggagg
gacatggtttgcatgcacatgcaaatgttggatcaacaccttcattgtccaacgtttgca
actcatcgtttcttatcacaatcctacccaagcatagctggtgaatctgttactaatctg
cgttattctcccattacataccctagtgtattgggagagccactacatggagaggatctt
gcaaactccattcctaagggtggtttagactgggaacgagctcttcgctgcttaaggcat
gctctccgcacaaccccatcaccagactggtggagacgtgttcttctcgttgccccttgt
tacagatcacagtctcaacaatcatcaactcctggagctgttttctcacctgatatgatt
ggtgaggcagttgctgacaggacaatcgaactcttgaggcttactaactcagagactcag
tgctggcaagattggcttttgtttgccgacatatttttcttcctaatgaaaagtggatgc
attgacttccttgattttgtggataagcttgcttctcgagtaacaaatagtaaccaacag
gttctacggagtaatcatgtcacttggttgcttgcacagattatccgcattgagattgta
atgaatactcttagttcagacccaagaaaggttgaaaccacaagaaagataatttcattc
cataaagaagacaagacccttgatgccaataatattggccctcaaagtattcttcttgat
ttcattagtagcagtcagactctgcgcatttggtctttcaatacttcgatcagagagcat
ttgaacagtgatcagcttcagaaaggaaaacaaatagatgagtggtggaaacagatgaca
aaagcttctggtgagagaatgatagactttacgaacttggatgaacgggcaacggggatg
ttctgggttctctccttcactatggcgcaaccagcttgtgaagcaataatgaactggttt
acgtcagctggaatggcagatttaattcaggggcctaatatgcagccaaatgaaagaata
atgatgatgcgtgaaacttaccctctgtcaatgtcattgctttctgggttgtctattaat
ctttgtctgaagcttgctttccagcttgaagagactatatttcttggccaggctgtacct
agcattgctatggtggaaacctatgtgagattactgctaataacgcctcattcattgttc
cgtccccattttacaacattaacccaaagatctccatctattctgagcaaatctggcgtc
tctttgctcctacttgagatactaaattacagactacttcctctatataggtatcatgga
aaaagcaaggcattgatgtatgatgtcacaaagataatatcaatgattaagggtaaacgt
ggagagcatcgtctttttagattagctgaaaatttgtgcatgaatctgatcctctcgctg
aaagacttcttttttgtgaaaaaagaactaaaggggccaactgagtttactgaaactctt
aaccgcataacgataataagtctcgctatcaccatcaagacacgtggcattgctgaggtt
gaacacatgatttatcttcaaccattgctagagcaaattatggcaaccagtcagcatacc
tggtcggaaaagacgttacgttatttccctcctcttattcgcgactttttaatggggaga
atggataagaggggccaagctatccaagcatggcagcaggcagaaacaactgttattaac
caatgcaatcagctgctctcaccatctgctgagccaaactatgtcatgacttatttgagc
cacagtttccctcagcaccgtcaatatctttgcgctggtgcttggatgctgatgaatgga
catcttgaaatcaacagtgcaaatcttgctcgtgttttaagagagttttcacctgaggaa
gttacagcaaatatctatacgatggttgacgttcttctgcatcatatccaatttgaggtg
caaagaggccatctagcacaggacttactatccaaagcaatcacaaatctttctttcatg
caggacttactatctaaagcaatcacaaatctttctttctttatatggacacatgagctt
cttccactggatattttactgctagctcttattgacagggatgatgatccttatgcttta
cgccttgtgataagtcttcttgaaaagccagagcttcagcaaagagtcaaggcattctgc
agttctcgttctccagagcattggctcaaaaatcaacatcctaaaagagttgagctccag
aaagcgcttggtaaccatctatcatggaaggaccgttatccccccttcttcgatgacatt
gctgcacgcttgcttcctgttatcccgctgattatttataggcttattgagaatgatgcc
acagacattgcagacagagttcttgcattttattcttccttgcttgccttccacccgcta
aggtttacgttcgtacgtgatattcttgcatatttctatggtcatcttccaatcaaactg
attggtaggatcctcaacttgctgggtgttagcactaagactcccttctcagaatctttt
gctaaatatttggtgtcctctaattcatcagtttgtccaccaccggaatactttgccaac
cttttgctaaacctggtcaataatgtcatacctcctttgagtagcaaatccaaatcaaac
ccagctgacacaacacgctcaactttcaacaagcatcatgcgtcttcacaacctggtgga
atcggcaataacgatggtcagagggcattttatcagaatcaagatcctggctcgtatacg
cagcttgttttggaaacagcagctattgagattctctcacttcctgtatctgctgctcaa
atagtgtcctctttggttcaaataatagctcatgtacaagcaatgcttatacagtcaaat
agtggccaaggaatgtcaggtggtttggggcaaagttctgggctgccaacttctccttca
ggcggaggtgctgaacctgcaggttccaaccaaacaaacagtgctgcaagtgggatcaat
gccactaactttgtttctaggagtggctactcttcccaacaattgtctgttttcatgatt
caagcatgtggtcttttgctggcacaactcccaccagaattccacatgcaactatactca
gaagcagctcgtgtcataaaagattgctggtggctagctgatagttcaaggcctgttaaa
gagcttgactctgctgttggctatgcactgctggatcctacatgggcttctcaagacaac
acatctacagccataggtaacattgtcgcccttctgcactcattttttagcaatcttcca
caagaatggctggaatctacccatactgtcataaaacaccttcggccagtcaattcagtt
gccatgttaagaatcgccttccgcatattgggtcccttgttacctcgtctagcctttgcc
cgacctttgttcatgaagaccttggcattactgttcaatgttttgggtgatgtatttggt
aagaactctcaggtctcaaatcctgtggatgcttcagaaattacagacataattgacttc
ttgcatcatgctgtgatgtatgaaggccaagggggtcccgttcagagcactagcaaacct
aagctggagatactaacattatgtgggaaagttatagaaattttgaggccagacgtgcaa
catctcctctcacacctgaaaactgatcccaactgctcaatatatgcagcgactcatcca
aagctcgttcaaaacacatcctaa
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