Panicum hallii (Hall's panicgrass): 112883453
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Entry
112883453 CDS
T07366
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112883453
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phai04812
]
112883453
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
112883453
Microtubules and associated factors
gamma-tubulin ring complex
112883453
Cytoskeleton proteins [BR:
phai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
112883453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
EIF3I
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
PROPPIN
PEP5_VPS11_N
Shugoshin_N
bZIP_2
WD40_like
Herpes_BLRF2
Motif
Other DBs
NCBI-GeneID:
112883453
NCBI-ProteinID:
XP_025804539
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All DBs
Position
2:24222136..24231957
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AA seq
773 aa
AA seq
DB search
MGFVDPAAPLLATCGGDTVKLFDVTVESGDPCVLAYTPAPGNPVNAVKWNHTNLIVASAG
DDKKISLWHKKGQNVGQLPTSTVDRGDDIEECIYSISFSNKGSRYLCSGGSGHIVRIWDL
QRKRCIKWLSGHTDTITGVMYNCKDEHLASISMKGDLILHNLASGARAAELSDPNGQVLR
VLDYSRNSRHLLVTAGDDGSVHLWDTTAKSPKVSWLKQHSAPTSGVCISPSSDKIIATVG
LDKKLYTLDSSSRRPTHTIPHEAPFSSLAYNDDGTILAAGTNSGRVIFYDVRGKPQPLTI
LRAYNSSEAVTGLCWQRSKPVIVNENSSSEVALLGGTSEESVLMPDPLPSATPTSFSSGV
VTVGLRSSLTPNTSGFLSTSNSSTMEETPYRARPLSGGPLSKLQAPRSNYNLKDDMDVFS
PLVDVQPFTPSSGSWWDEHGNDDTKKDDKPGEKKLSTTRKFSYMEGNDEPHAISDWRSTA
NSRQDFSSVTTTSMPSWKSELSISSPETATGNALPDRLTQRQQISRFGASAFSTGGLAFT
ALQDSSSTGHSLKGSLTSNILMNLQNKGILSNSHSSLDASSPNLQSSLLSSYGSKAVSSV
NPDQTGEAQSSSMWRPTTYTDKMSSSSVFSDGLASAFGSPKSKKTGAETKDELLSSLLSR
QEAATASSSPSPLASNGVGPPQLSNTSSSTDQQGASSFSLQYVQRMLEESLGSVQKSIHE
DVRNLHIELLRQFHMQEMEMSGVLNLVLEKVEGLTKEVQQLRRENQQLRQQLL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtggatccggcggcgccgctgctggcgacgtgcggcggcgacacggtgaag
ctcttcgacgtcacggtggagtccggcgacccctgcgtcctcgcatacacccccgcgccc
ggcaaccccgtcaacgccgtcaagtggaaccacaccaatctaattgtagcaagcgccggg
gatgataagaagatctcattgtggcataaaaaaggtcaaaatgtaggacagctaccaaca
tccactgttgatcgtggtgatgacatagaggaatgcatttattctatcagttttagcaac
aaaggttctcgatatctttgctctggtgggagtggccatattgtcagaatatgggatttg
cagcggaagagatgcatcaaatggctaagcggtcacactgacacaattactggtgtaatg
tataactgcaaagatgaacatttggcatcaatcagcatgaagggggatctcattcttcac
aatcttgcttctggagcacgtgctgctgaacttagtgatccaaatggacaggttttgaga
gtgcttgattattcacgaaacagtagacatttattggtgacagcaggagatgatggttct
gtgcatctttgggatacaactgcaaagtctccgaaggtgtcatggctgaagcaacattct
gcacccacaagtggtgtttgtatctcgccatcaagtgacaagataattgctacggttggc
ctggacaagaagttgtacacattagattcatcgtcaagaagaccaacacacaccattcct
catgaggccccattctcctcattggcatataatgatgatggtactatattagctgcaggc
acaaatagtggacgtgtgatattctatgacgtccggggaaaacctcagccattgaccatt
cttcgtgcctacaatagctctgaggctgtgacaggtttatgttggcaacggtcgaaacct
gtcattgttaatgagaacagttcttctgaagttgctcttcttgggggaactagtgaagag
tctgttcttatgccagatcccttgccttcagcaacacctacaagtttttcttctggagtg
gtcactgtaggtcttcgctcttctttgacaccaaacacaagtggctttctttcaacctca
aactcttctaccatggaggaaactccatatagagcacgtccgttatctggaggaccatta
tcaaagctacaggctcctcgtagtaactataatctaaaggatgatatggatgtcttttct
ccacttgttgatgtccagcctttcacaccatctagtggcagctggtgggatgagcatgga
aatgatgataccaaaaaagatgataaaccaggagaaaagaaattgtcaacaactaggaag
ttttcgtatatggaagggaatgatgagcctcatgcaatctcagattggaggtctactgca
aattcaagacaggacttctcatctgtgactactacatccatgccatcatggaaaagtgaa
ctgtctatatcttcgccagagacagcaactggaaatgcattaccagataggctaactcaa
cgtcaacagatctcacgctttggggcttcagccttttcaacaggtggcttggcttttaca
gccttacaagattcatcttccaccggtcactcgctgaagggttctctaacaagtaacatt
ttaatgaacctacaaaacaagggcatcttgagcaactcacactcttccctggacgcatcg
tctcccaaccttcagagttcacttctctcatcctatggttcgaaggctgtttcatctgtg
aatcctgatcaaacaggagaggcacaatccagttctatgtggaggccaacaacatatact
gataaaatgagctcatcttctgtttttagtgatgggttagcttcagcgtttggctcaccg
aaatcaaagaagacgggagctgaaacaaaagatgagttgctcagtagtcttttgtcaaga
caagaggctgcaactgcctcttcatctccaagccctctagcaagcaatggggtagggccg
ccacaattgtcaaacacaagttcttcaactgatcagcagggagcttcttccttctcactt
cagtatgtgcagcgcatgcttgaagaatctcttgggtctgttcagaagtccatccatgag
gatgtgagaaatctccacattgaacttttaagacagtttcacatgcaggagatggaaatg
tctggcgtgctgaatttggtcctggagaaggtggaaggcctgacaaaggaagtgcagcaa
ctaagaagggagaaccaacagctccggcagcagcttctctaa
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