Panicum hallii (Hall's panicgrass): 112883639
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Entry
112883639 CDS
T07366
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase isoform X1
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112883639
Enzymes [BR:
phai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
112883639
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112883639
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_23
Methyltransf_12
MetW
Methyltransf_8
Ubie_methyltran
EURL
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
112883639
NCBI-ProteinID:
XP_025804766
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Position
1:complement(55659008..55662009)
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AA seq
380 aa
AA seq
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MIQVFSGITARNFHRTIHASNLYSISFRHKELFCWKPTCQHITTNNSMRPNDLIGAQDRV
PAEGNCNCSSSVQSTPEIEKKYVHRVYDAIAPHFSATRFAKWPKVAEFLNSLRSGSVVLD
AGCGNGKYLGFNPDCFFIGCDISSPLIEICAGRGHEVLVADAVNLPYRDNFGDAAISIAV
LHHLSTDDRRRKAIEELIRVVRRGGLVLITVWAREQEDKSLLNKWTPLYEKYTEEWVDQS
SPPVRSQSATLLESIAETDEDAGVMKQADDRLKKNHDGVEDKTITACSNSNADENEKNQQ
EYFVPWHLPFHRAEISGASAAALENGFAKKDEKKGTVVYNRYYHVFVEGELQRLVSGIKS
AAIVDQFYDKSNWCIVLEKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatacaggtattttcagggataacagcaagaaactttcatagaaccatacatgcatct
aatctgtatagtataagctttcggcacaaagaattattttgctggaagccgacgtgtcaa
catattaccaccaacaattcaatgaggccaaatgatttgattggggctcaggacagggtg
cctgctgaaggaaactgcaattgctcctcaagtgttcagtccactccagaaattgagaag
aagtatgtgcatcgtgtctatgatgccatagctcctcattttagcgcaactagatttgct
aaatggcccaaggttgcagaattcttgaattccctgaggtcagggtcggttgtactggat
gctggctgtggtaatggcaagtatttgggcttcaaccctgattgtttcttcataggatgt
gatataagctctccacttattgagatatgtgctgggagaggacatgaggtgttggtcgct
gatgctgtcaacctcccatacagggataattttggtgatgcagcgatttcaattgcagtg
ttgcatcatttaagtactgatgataggcggaggaaggccatagaagagctaatccgtgtt
gtccggagaggtggtcttgtgctcatcacagtctgggctagggagcaggaagacaagtca
ttgctcaacaagtggactcccctctatgagaagtacactgaagagtgggttgatcagagc
agtcctccagtacgtagtcaatctgcaactcttctggaaagcattgcagaaactgatgaa
gatgctggtgtaatgaagcaagcagatgatcgattgaaaaaaaatcatgatggtgttgag
gataagaccattacagcctgtagtaattcaaatgctgatgagaatgagaaaaaccagcag
gaatactttgttccatggcatctaccatttcaccgagctgaaatcagtggtgcatctgct
gctgctcttgagaacggatttgcaaagaaagatgagaagaagggcacggtggtctacaat
cgttattatcatgtctttgttgaaggagaacttcaaagattagtctctggaataaagagt
gctgctattgttgaccagttctatgacaaatccaactggtgcattgttctcgagaagctt
tga
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