Panicum hallii (Hall's panicgrass): 112883818
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Entry
112883818 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112883818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112883818
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112883818
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112883818
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
112883818
NCBI-ProteinID:
XP_025804845
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All DBs
Position
3:4481775..4486533
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AA seq
356 aa
AA seq
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MDMDSVECLSLPDAAMDVDDVDTHPHHGHHAHLGLPLHPAHLPSAGAGRAFPKVNAGAGA
AAAAAAAAAAAAGAAAAAGAGGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCK
ARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRP
YNCPYAGSECAVSGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFH
CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIR
DSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacagcgtggagtgcctctccctcccggacgccgccatggacgtggacgac
gtcgacacccacccgcaccacgggcaccacgcccacctcggcctcccgctccaccccgcc
cacctgccctccgccggggccggccgcgcgttccccaaggtgaatgcgggggccggggcg
gcggcggcggctgctgctgctgccgcggccgcggctggggcagcggccgcggcaggagcg
ggcgggggcccgccggcgaccagcgtgcacgagctgctggagtgccctgtctgcaccaac
tccatgttcccgcccatccatcagtgccaaaatggacatactttgtgttcgacgtgcaag
gccagggtgcataaccggtgccctacatgcagacaagagcttggtgatatcagatgcttg
gcactggaaaaagtagcagagtcactagagcttccctgtaagtactgctctttaggttgc
cccgagatcttcccatactacagcaagataaagcatgaagcgcagtgcagcttcaggcca
tataattgcccttatgctggctctgaatgtgctgtgtctggtgatattccattccttgtt
gcacatttgagggatgatcacaaagtcgacatgcacagtggctgcacattcaaccataga
tatgtcaaatccaacccacgagaggttgaaaacgccacatggatgctaacagtattccat
tgttttgggcagtacttctgcctgcactttgaagccttccagctcggaatggctccagtt
tatatggctttcctccgatttatgggggatgagaatgaagcaaggaactatacatacagc
ctagaggtcggtggtaacggtaggaaaatggtatgggaaggcactccaaggagtatccgt
gacagccatcgcaaggttcgggacagccatgacggcctcatcatccagaggaacatggcg
ctgttcttctcaggcggtgataggaaggagctgaagctgagggtgactggccggatctgg
aaagagcagaccaacccggacggagcctgcattccgaacctttgcagctga
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