Panicum hallii (Hall's panicgrass): 112883825
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Entry
112883825 CDS
T07366
Name
(RefSeq) FACT complex subunit SSRP1-B isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112883825
03036 Chromosome and associated proteins [BR:
phai03036
]
112883825
Transcription factors [BR:
phai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
112883825
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
112883825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
112883825
NCBI-ProteinID:
XP_025804850
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All DBs
Position
3:9099728..9105325
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AA seq
638 aa
AA seq
DB search
MTDGHHFNNISLGGRGGGNPGQFKLYSGGLAWKKQGGGKIIEVDKADITSVTWMRIPKSY
QLSVGTREGLSYRFFGFREQDVSGLTNFIQKSTGITPEEKQLSISGHNWGGIAINGNVLC
FNVGSKEAFEVSLADVSQSQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDEHRTSAQMLWQAISVQIDGGGSSETAVATFDGIAILTPRGRYSVELHHSFLRLQGQAN
DFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETETVVERELTLS
EEVLAEKYKDRLESSYRGLIHEVFSMVLRGLSGAKMTRPSTFRSCQDGYAVKSSLKAEDG
LLYPLEKGFFFLPKPPTLIPHEEIEYVEFERHGAGGASISSHYFDLLIKLKNDQEHLFRN
IQRNEYHNLFNFISGKHIKILNLGDGQGRAGGVTAVLQSTDDDSVDPHLERIKNQAGNEE
SDEEDEDFVADKDDSGSPTDDSDEDGSDASLSGGEKEKSSKKEASSSKPPVKKKQKSVPD
EGSQKKKPKKKKDPNAPKRAIAPFMYFSKAERANIKSSNPELATTEIAKKLGERWQKMSA
EERQPYIEQSQVDKQRYAEESAAYRGATTQQGSGDGSE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccatcacttcaacaacatctccctcggaggccgcggcggcggcaaccct
gggcagttcaaactttattcaggaggactggcatggaagaagcaagggggaggaaagatc
attgaggttgataaagctgatatcacatctgtgacatggatgagaattcctaaatcctat
cagcttagtgttgggacaagggaaggcctcagttacaggttctttggcttccgtgaacag
gatgttagcggcctgactaacttcatacaaaagagcacgggaattacaccagaggagaag
cagctttccattagtgggcacaactggggtggaattgcaataaatgggaatgtgctttgc
tttaatgtcggttcaaaggaagcatttgaagtctctctagcagatgtgtcgcagagtcag
atgcaagggaagacagatgtcgtcctagagttccatgtcgatgatactactggggctaat
gagaaagattcgctgatggatttaagttttcatgtaccaacttcaaatactcaattcgtt
ggagatgagcatcgtacttcagctcagatgctatggcaggctatatcagttcaaattgac
ggtgggggctcctcagagactgctgttgctacattcgatggaattgcaattcttacacca
agaggtcgatacagtgttgagcttcatcattcatttttgcgactccaaggacaagctaat
gatttcaagatacagtatagcagtattcttcgcctctttgttttaccaaagtcacacaac
cctcatactttcgtggttatcacgcttgacccaccaattcgcaaaggacaaacattatat
cctcacattgttattcagtttgagacagagacagtggttgaaagggaactgacattaagt
gaggaggttttggctgaaaaatacaaggataggcttgagagctcttataggggtctaata
catgaggtattctccatggtccttcgtggcttatctggtgctaaaatgacaaggccaagt
acattccgcagttgccaagatggatatgcagtcaaatcatcacttaaagctgaagatggt
ttgctttatccacttgaaaagggctttttctttctgccaaaaccccctacactcattcct
catgaggagattgaatatgttgaatttgagcgtcatggtgctggtggtgccagtatttca
tctcattattttgacctcctgataaagctgaaaaatgatcaagaacatctcttcagaaac
atccaaaggaatgaatatcataacctgttcaacttcatcagtggtaagcacataaaaatt
ctgaatcttggagatggtcaaggtagagctggtggtgtcactgctgttcttcagagcact
gatgatgattctgtcgatccacatctggagaggataaaaaatcaggctgggaatgaggaa
agtgacgaagaggatgaagattttgtggcagacaaggatgatagtggatctcctactgat
gattctgatgaggatggctctgatgctagtttgagcgggggagaaaaggagaagtcttcc
aagaaggaagcaagtagctcaaagccacctgtgaagaagaagcagaagagtgtgcctgat
gaaggttctcagaaaaagaagccaaagaagaagaaagatccgaatgcccctaaaagagcc
atagctccattcatgtacttctcaaaggctgagcgagctaatattaagagcagtaatcct
gaactggctaccacagagattgcgaagaagctcggggagaggtggcaaaagatgtcagct
gaggagaggcaaccatacattgaacagtcccaggtcgacaagcaacgctatgcggaagag
tctgccgcctaccgcggtgcaaccactcagcagggctccggcgatgggtcggagtga
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