Panicum hallii (Hall's panicgrass): 112883988
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Entry
112883988 CDS
T07366
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
phai04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112883988
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112883988
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112883988
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112883988
03036 Chromosome and associated proteins [BR:
phai03036
]
112883988
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112883988
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112883988
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112883988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
112883988
NCBI-ProteinID:
XP_025805054
LinkDB
All DBs
Position
3:complement(12325288..12328249)
Genome browser
AA seq
501 aa
AA seq
DB search
MWKQFLSKLPRKSSASGDSGQCSNGTGIQRTTSCGSIPPGRPASAIRRMSSAVFPSSVVA
GIEPLVSFKDVPNSEKQNLFVSKLSLCCVVFDFSDPNKSSVEKDIKRQALLDLIEFVESS
SARFSEAAIAACARMCAINLFRAFPPNYRSGSSGGGEGDEDEPMFDPAWCHLQLVYELLL
KFIGSSSLDAKVGKRHFDHSFIVKLLNLLDSEDPRERDCLKTILHRIYGKFMVHRPFIRK
AVSNIFYQFVFETDRHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSVGL
YLQQLTYCVTQFLEKDPKLASSVIIGLLRYWPITNCQKEVMFLSEIEEILESTSQAEFQK
CMVPLFRRIAHCITSSHFQVAERALFVWNNDHIISLIAQNRQSIMPLIVPALEQNIQNHW
NQAVLNLTMNVKKMFSEMDEDLFSSCLDKYKEDEEKRASLEVKRKLTWEKLESAAAFQPV
TGHTAILVGHQLSANMIATLI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacaatttctcagcaagctgccccggaagtcctcggcctccggggactcaggt
cagtgcagcaatggcaccgggatacagcgcacgaccagctgtggaagcattccgcctggc
cgcccggcttccgccattaggcgcatgtcatctgccgtcttcccctcaagtgttgtggct
ggcattgagccgttggtttccttcaaggatgtcccaaactcggagaagcaaaacctgttt
gtgagcaagttgagcctgtgctgtgtcgtctttgatttctcagacccgaacaagagttcg
gtggagaaggatatcaaaaggcaggcattgctggatcttatagagtttgttgaatctagc
agtgctcgcttctcagaggcggcgattgctgcctgtgctaggatgtgtgccatcaacctg
ttccgggcgttccctcctaattacaggtctggttcatctggtggtggtgagggtgatgag
gatgagccgatgtttgatcctgcatggtgccatctgcagcttgtatatgagctactactg
aaatttattggatcctcatccttggatgcgaaggtagggaagaggcactttgatcactca
ttcattgtgaagctccttaatcttcttgattctgaggatccaagagaaagggattgtttg
aagactattctgcacaggatatatgggaagttcatggtacaccgtcctttcatccgcaaa
gcagtgagcaatatattctaccagtttgtctttgagactgatcggcataatgggattgct
gagctgctggaagtctttggcagtgtcattagtggctttgcattgcctttgaaggaagag
cacaagatctttctttggagagttttgattcctttacacaaaccgaaatcagttggtttg
tatctccagcagttgacctactgtgtgacacagtttctcgaaaaggacccgaagcttgca
agctcagtaataattggtttgttaagatattggccaataacaaattgtcagaaggaagtg
atgtttctgagtgagatcgaagagatcttggagtctaccagccaggcagaatttcagaaa
tgtatggttccattgtttcggcggattgctcattgcatcaccagctctcacttccaggtt
gctgaaagagcactctttgtatggaacaatgatcacattatcagcttgatcgcgcaaaac
cgccaatccataatgcctctcattgttccagcattagaacagaatattcagaatcactgg
aaccaagcagtccttaatctgacaatgaatgtaaagaagatgttttctgagatggacgag
gatctcttctcatcatgcctggataagtacaaggaggacgaagaaaagcgagcgtcgtta
gaagtgaagcggaagctgacctgggagaagctcgagtcagctgcagctttccagccagtg
accggccatacagccatcctagtgggacaccagctgtcagcaaatatgatcgccaccctg
atctag
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