Panicum hallii (Hall's panicgrass): 112884180
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Entry
112884180 CDS
T07366
Name
(RefSeq) golgin candidate 5
KO
K20286
TATA element modulatory factor
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112884180
Membrane trafficking [BR:
phai04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112884180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
112884180
NCBI-ProteinID:
XP_025805322
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All DBs
Position
3:12009012..12018111
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AA seq
1043 aa
AA seq
DB search
MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKRGDDEEASGSRTSNSDG
IGFFNPVMAFMGHNGEEDITEVSKKPQSPKNQPAEEENHSTPTKQQTSKVDASEVSGTTK
SPKQPSKAEEGHNMSTESPVSKADVSEQSMTSQTLTHPSAVEENFDGSIKSPVSKGDDSE
ASETSQSPTHSSTAEETHSSSIENISSVMNESQDHQDSKHSGPSDEAQPNQLGESVGDIP
DGGASSSPTKIDQLGDTKTRESIHIGKEETSDGNALQSQPAESVLASSDGIVEAEDKIDQ
QSDAPKEISSPQDSTDTVDKATHVEVKVHDENTNTEKNEEESNKTEAGAASVNEQEDIVP
EHPEEFRSKSIIQEHDSHLQNESLVNSTDVPAEPVEVSSPANDFRKEEKAQQSVRSTNSS
TLESAGSVVELEKLRREMKMMDAALQGAARQSQSKADEIARLMNENEQLKSTIDDLKSKS
SEAELDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAE
GEELSKKQAAQEATIRKLRAQIRELEEEKQRLNSKIQVEETKVESIKRDKAATEKLLQET
IERNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKVELESLLREAGEKENMLIKTIE
ELRHSLTRQEQEAAFREERIKRDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQ
ETAARREEAWAGVERTLNSRLQEAEAKAAAAEEKERSVSERLSQCLSRITVLETQITILR
TEQTQLSRSLEKERQRASESRQEYLAIKEEAAIQEGRAKQLEEELKELRARHKKELQEAA
EHRELLEKDLEREKAARAEIEKTSSREAPKVPLPDQTRNSPLRKLSSSGSINSLEESHFL
QASLDLSDNASLERRMSSESNMSYYLRTMTPSAFESALRQKDGELASYMSRLASLESIRN
SLAEELVKMTEQCEKLRTEAAALPGLRAELEALKQRHFQALELMGERDEELEELRNDIVD
LKEMYREQVDLLVSQLQALGARV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtggtccgggaaggtgtcgctgggcgggctgcaggacatcgccggagcagtc
aacaagatcagcgagagtgtgaagaacatcgagaagaacttcgacagcgcgctcggctta
gaggagaagcgcggcgacgatgaagaagcatcaggatcacggacatccaactctgatggg
ataggattcttcaatcctgtcatggctttcatgggacacaatggtgaggaggatatcacc
gaagtatcaaaaaagccacaatctccaaagaatcagccagcagaggaagaaaaccatagc
acccctactaagcagcagacatctaaggtagatgcttctgaagtatcaggaacaaccaaa
tctccaaagcagccttcaaaagcggaagaaggtcataacatgtccactgagtcacctgtt
tctaaggcagatgtttctgagcaatccatgacatcacaaactctaacacatccttcagca
gtagaagaaaattttgatggctccattaagtcaccagtgtctaagggggatgattctgaa
gcatcagaaacatcacaatctccgacacattcttcaacagcggaagaaactcatagtagt
tccattgagaatattagttcagttatgaatgaaagccaggaccatcaagatagcaaacat
tctggtcctagtgatgaagcacagcctaatcagcttggagagtctgtgggtgacatacct
gatggtggagcatcttcttcgccaaccaaaatagatcaattaggtgacaccaaaacaagg
gaatctattcatattggaaaggaagagacatctgatgggaacgccttgcagtcacaacca
gctgagtccgttctagctagctcagatggtatagttgaagctgaggacaaaattgatcaa
caatctgatgctcccaaagaaataagtagcccacaggatagcactgatacagtagacaaa
gctactcatgtcgaagtcaaagtacatgatgaaaatactaatactgaaaaaaatgaggaa
gaaagcaataagacagaggcaggggcagcatctgtcaatgaacaggaggatattgtgccg
gagcatcctgaagaatttagatcaaagtccataattcaagagcatgattcgcatttgcag
aatgaatctctggtgaattcgacagatgtacctgctgaaccagtggaagtaagttctcct
gcaaatgattttagaaaagaagaaaaggctcagcaatctgttagaagcacaaattcttcg
actctggaatctgctggttctgtcgttgagctagagaaattaagacgtgaaatgaaaatg
atggatgctgcattgcaaggtgctgcaaggcaatctcagtccaaagctgatgaaattgca
agattgatgaatgagaatgagcaactcaaatcaacaattgatgatctcaagagtaaatca
tctgaagcagaattggatgcgcttaaggatgaataccaccagagagtagcaactcttgaa
aggaaggtgtacgcactaaccaaagaacgggatactctaaggagagaacagaataaaaaa
agtgatgcagctgcccttttgaaagaaaaggatgagattatcaatcaggtcatggctgaa
ggtgaggagttatccaaaaagcaagctgctcaagaagctacaattcgaaaactgagggca
cagattcgtgagcttgaagaagaaaaacaacgtctgaactcaaagatccaggtcgaggag
actaaggttgagagcattaagagagacaaggcagcaactgagaagttgcttcaagaaacg
atagaaagaaatcagactgaacttgcagctcagaaggagttttacaccaatgctcttaat
gcagctaaagaggctgaggcattggctgaagcaagagtcaacagcgaagccaaagttgaa
ctggagagccttttaagagaagctggtgaaaaagaaaatatgttgattaagacgatcgag
gagttgaggcattctcttacgaggcaagaacaggaggctgctttcagggaagaaaggata
aaaagggactacgatgatcttcaaaagcggtatcaagccagtgaacttcgttataatgaa
ctggtcacacaagttcctgagtctaccagaccactcctaaggcaaattgaagccatgcag
gagacagcagctcgtagggaagaagcttgggctggtgttgagagaacattgaactctcgc
cttcaggaagcagaagctaaagctgctgctgcagaagaaaaagagcggtctgtaagtgag
cgattgtcacaatgtttatcccggataactgttcttgagacccagattacaattcttaga
acagagcagacacagctgagccgatctcttgaaaaggagaggcagagagcttctgaaagt
agacaggagtacctagcaattaaagaggaggctgcaatacaagaagggcgagccaaacaa
ctcgaagaagaactaaaggagcttagggctaggcacaagaaggagctgcaagaagcagca
gaacacagggaactgcttgagaaggaccttgaaagggaaaaggctgccagggcagagatt
gagaaaacatcttcccgtgaagcacctaaggttccacttcctgatcaaacaagaaattcc
cctctaagaaagctctctagttctgggagtataaatagtctggaagaaagccatttcctt
caagcatcattggatttatcagacaatgcttcattagaaagaagaatgtcttcagaaagt
aatatgtcatattatctgaggaccatgactccaagtgcttttgaatcagcactgcgtcaa
aaggatggagagcttgcttcctacatgtcacgcttggcctcattggaatctattcggaat
tcactggcggaggagttggtgaaaatgacagaacaatgtgaaaagttacggactgaagct
gctgctctgcctggcttaagggccgaattggaggctctgaaacaaaggcactttcaagct
ctagaacttatgggggaacgtgatgaagagctggaagagctacgaaatgatatcgttgac
ttaaaagagatgtacagagagcaagtggatcttctcgttagccagctccaggcattgggt
gcccgtgtatag
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