Panicum hallii (Hall's panicgrass): 112884492
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Entry
112884492 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112884492
KO
K19022
AP-5 complex subunit beta-1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112884492
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
112884492
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
112884492
NCBI-ProteinID:
XP_025805684
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All DBs
Position
1:59668213..59672069
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AA seq
1091 aa
AA seq
DB search
MDRHLSPQEWEQLLDDFSSSPSRRHRWLHLPLLDLAVSSLPRRDLPSHLKPLLLSLIDDH
LLPPSPRSLPILLTSFLSFPPDHPLRDHLLVTVVSAFASALAAPLSKDHDAPPLAALVDA
LLAAANRPNHAPDRAARALACDALRALDAALPGLLAEALGHLYALAAAERSPAAQSYLLL
LASAARHAVRLGRLRATASILAVAGPPTPFSVPAHLLSPPAASMAPPPSEVNVRDIRKVL
ALLMDRPQVLTPAAAMEMTAILAEIASAVLKWAPAIAAHIKVQFGGMLYSSNPMLLHSLL
TLFLQFPDAFGAEDECTMARRLALAAREAHRPLAARLLALHWLLGSTMFRNLVPGLARWF
YPNLFDPLALKAKKLECLAYVAARVDGDKVAGGRASEQATGLLDDGLVCVSAFRWLPAWS
TETGVAFRALHRVLIIAAPHSTEDMRCSGAGELLNSTIFHHLQAILVDMASEHRGLVPVI
AEFTNRLLACNSHQWAGEQLLRTLDERLLPRLEPGYQLASYYPLFEEIAQNETVPQLRLI
ELLTKQMVSLTKKHGPDTELKSWSQGSKVVGICRVMLKHHHSSHIFLPLSHLLVLTIESF
PDLEVRDHARICLRMLSCVPGKKLRHLMGVGEQPSGVTPSHPGSLFDIPSPRPAQDLTSM
TDMASYIHLERIVPLVVKQSWALTLPNFSVCSRPSGHILSIQDVSSAPSEQEKATGPAIE
RIGYTQETLRVMDSKGAETLQILRRYFACIPDYLHSSGLKIRIPCTFRFDSEPFNHAWRS
DSPVSGSDEADELPALYAVMITFSSSAQFGKIPSCHVPFILGEPPGSGMDIVPIDNQNLE
ESSYCASVVIELEPREPSPGLIDVSIAANTENCQVLSGSLKPVTVGIEDMFMMASVPPDT
LKEGVAVYYQDLFHALWEACDSSSNTGRETFPLSGGKGSAAINGTRSVKLMEVTPKVLIG
AVERYLASFVVSVAGDSLVNILRGNGIIKNIVWEESVSDASVGADALVPYSPDSNLQLQL
IDDDDIGVGSERYGHESKRDMGVMRVMIFLPPRYHLLFLMEVGCASTLVRIRTDHWPCLA
YVDEYLEALIS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcacctctcgccgcaggagtgggagcagctcctcgacgacttctcctcctcg
ccctcccgccgccaccgatggctccacctcccgctcctcgacctcgccgtctcctccctc
ccccgccgcgacctcccctcccacctcaagcccctcctcctctccctcatcgacgaccac
ctgctcccgccctccccccgcagcctccccatcctcctcacctccttcctctccttccct
cccgaccacccgctccgcgaccacctcctcgtcaccgtcgtctccgccttcgcctccgcc
ctcgccgcgcccctctccaaggaccacgacgcaccgcccctcgccgctctcgtcgacgcg
ctgctcgccgccgccaaccgccccaaccacgcgcccgaccgcgccgcgcgcgcactcgcc
tgcgacgccctgcgcgccctcgacgccgcgctcccgggcctcctcgccgaagccctcggc
cacctctacgcgctcgccgccgcggagcgctccccggccgcccagtcatacctcctcctg
ctcgcctccgccgcgcgccacgccgtacgcctcgggaggctccgcgccaccgcctccatc
ctcgcggtcgccggtccgcccacccccttctccgtgcccgcccacctgctctcgcctccc
gccgcctctatggcgccgccgccctccgaggtcaacgtccgggacataaggaaggtgctc
gctctgctcatggacaggccgcaggtgctcacgcccgcagctgccatggagatgacggcc
atccttgccgagatcgcatcggctgtgctcaagtgggcgccagccatcgcagcgcacatc
aaggtgcagttcggggggatgctctactcctccaaccccatgctgctgcactcgctgctc
acactcttcctccagttcccagatgcatttggggccgaggatgagtgcacaatggcacgc
cgcctagctttggctgctcgtgaggcgcaccgcccactcgcagcacgattgctggctttg
cattggctactcggctctaccatgttcaggaatcttgtgcctgggcttgcccgatggttt
taccctaacttattcgatccccttgcgctcaaggccaagaagctggagtgtctcgcttat
gttgctgctcgagttgatggggacaaggttgcaggaggcagagctagtgagcaagcgacc
gggctccttgatgatggcttggtttgcgtctccgccttcaggtggcttcctgcatggagt
actgaaacaggtgtggcgttccgagctctgcacagggtcttgattattgctgctcctcac
agcaccgaggacatgcgctgctctggggctggtgagctcctgaattctactatcttccac
catttacaggctatcttggttgatatggcatcagagcatcggggtttagtcccagtgatt
gctgagttcaccaaccgtctgctagcatgcaactcacatcagtgggctggggagcagttg
ctccggacacttgatgagcgcctgcttccaaggcttgagccaggctaccagcttgcgtca
tactaccctctttttgaggagattgcgcagaatgagacggtacctcagctccgcctaata
gaattgttaaccaaacagatggtttctctcaccaagaagcatggcccagacacagaacta
aagtcgtggtctcaaggaagcaaggttgtgggcatttgccgtgtcatgctgaagcatcac
cacagctctcatatcttccttcccctttcgcatcttcttgtgctcaccattgagtccttc
cctgatctggaagtccgggaccatgcaaggatttgcttgcggatgttatcttgtgttcct
gggaagaaactgaggcatctcatgggagttggcgagcaaccttctggcgtcactccttct
catccgggttccttgttcgacatcccatcaccacgccctgctcaagatcttacgagcatg
accgatatggcatcttacattcatcttgaaaggatcgtgcctctagttgtaaagcaatcg
tgggccctcacattgcctaatttcagtgtctgcagcagaccatctggtcacattcttagt
atacaggacgtgagctctgctccctcagagcaagaaaaggcaacagggccggcgatcgag
agaattggatatacacaggaaacacttcgtgtgatggattctaaaggtgcagaaacattg
caaatactcagaaggtactttgcgtgcattcctgactacctgcactcatctggtctcaag
ataagaataccctgcacgtttagatttgactcagagccatttaaccatgcgtggaggtca
gattcaccagtttcaggttctgatgaggctgatgagttgccagccctttatgcagtgatg
atcacattttcgtcaagtgcacagtttggaaaaatcccctcatgccatgtacctttcatt
ctaggggaacctccaggttctggtatggacattgtccccatagataatcagaacctggaa
gaatccagttactgtgcttcagtggtgatagaactggaacctcgagagccttcacctggc
cttattgatgtctcaattgcagcaaatacagagaactgccaagtcttatcagggtccctt
aaacctgttacagttggcattgaggacatgtttatgatggccagtgtaccacctgatact
ctgaaagagggtgtggctgtgtactaccaggatctgtttcatgctttatgggaggcctgc
gatagttcttctaacacaggtcgagagactttccctttgagtggagggaaaggatcagct
gccattaacggaactcggtctgttaagcttatggaggtaactccgaaggttttgattgga
gctgttgaaagatatctcgcttcctttgttgtcagtgttgctggagattcacttgtaaac
attctgagaggaaatggaatcattaagaacatcgtgtgggaagaaagtgtctcagatgcc
agtgtaggtgctgatgcactggttccatactcaccggacagcaatctccagcttcagctc
atagatgacgacgatattggggttggttctgagaggtatggccatgaaagcaagagggat
atgggagtcatgcgggtcatgatattcctaccacccaggtatcacctcctcttcttgatg
gaagtaggatgtgcctccacattggtcaggataaggaccgatcattggccttgccttgca
tatgtggacgaatacctggaagcgttgatttcttag
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