Panicum hallii (Hall's panicgrass): 112884547
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Entry
112884547 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112884547
03036 Chromosome and associated proteins [BR:
phai03036
]
112884547
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112884547
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112884547
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112884547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
PHD
Prok-RING_1
zf-RING_10
zf-RING_5
TRAF3_RING
Prok-RING_4
zf-RING_4
RING_XB3-XBAT31
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
112884547
NCBI-ProteinID:
XP_025805739
LinkDB
All DBs
Position
3:complement(9591829..9596490)
Genome browser
AA seq
759 aa
AA seq
DB search
MPNLPCDGDGVCMVCRVASPPEVDLLRCSTCATPWHSPCLSKPPALADAASWSCPDCSPD
SSPAPAPAGPGNDLVAAIRAIEADQTLSDQEKARHRQALLAGSAPAAADEDDDDDAADDA
LEIVGKNFSCVFCMKLPERPVTTPCGHNFCLKCFQKWIQNGKRTCGKCRAHIPAKMAEQP
RINSALVEVIRMAKISKNPNSSGSTAPYHYIRNDDRPDKAFTTDRAKKAGKANASSGQIF
VTIAPDHFGPILAENDPRRNIGVRVGETWEDRLECRQWGAHFPHVAGIAGQSTYGAQSVA
LSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAALRISCLRGYPVRV
VRSHKEKRSSYAPESGVRYDGIYRIEKCWRKIGIQGKFKVCRYLFVRCDNEPAPWTSDDH
GDRPRPLPKIKELQGATDITERKGRPSWDYVEKEGWKWVVPPPISKKPVLSGDPETDKRI
RRATKRAHMSVAERLLKEFACSICRVVIKEPLTTPCAHNFCKACLLGAYDSQASMRERSR
GGRTLRAQKIVKKCPSCPTDICDFLENPQINREMMELIESLQRKAVEEGDTKVASDDPEE
CGDGESEGNDGALAKEEDESSMNEDEQDSADADGSVKIVVEIKEEGKDDKKTKMDVTEVV
DVLVEEKAVKETKKRKGDVETGTDGAPAKRMKKNIAAVEEATCTPVKRIRKSGDVDSEGN
GSPVVSSGRRVTRSSANASEADDSPARRTRSRTRADAGC
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacctcccctgcgacggcgatggcgtctgcatggtctgccgcgtcgcctccccg
cccgaggtcgacctcctccgctgctccacctgcgccaccccgtggcactccccgtgcctc
tccaagccccccgccctcgccgacgccgccagctggagctgccccgactgctcccccgac
tcctccccggccccggctcccgccggccccgggaacgacctcgtcgccgccatacgcgcc
atcgaggccgaccagaccctctccgaccaggagaaggcgcgccaccgccaggccctcctc
gccggctccgcccccgcggccgccgatgaagatgacgacgacgacgcggcggacgacgcc
ctcgagatcgtggggaagaacttcagctgcgtcttctgtatgaagcttcctgaacgcccc
gtcacgacaccatgtggccataacttctgcctgaaatgcttccagaagtggattcagaat
gggaaaaggacgtgtgggaaatgtcgggcgcatattccggccaaaatggctgagcaacca
agaattaactctgcactagttgaagttatccggatggccaagatttcaaagaatcctaac
tcatcaggctctacagctccatatcactatattcggaatgatgataggcctgacaaggca
tttacaactgacagggctaagaaggctgggaaagcaaacgcttctagtggccagatcttt
gtgaccattgcacctgatcattttggccccattcttgcagaaaatgacccccgaaggaat
attggtgttcgagttggggaaacatgggaagaccgtcttgagtgcaggcaatggggtgcc
cattttcctcatgtagctggtattgctggccagtctacatatggtgcacaatcagtagcc
ctctcaggagggtatcaagatgatgaagaccatggagagtggtttctttacaccggaagt
ggtggaagggatctaagcgggaacaagcggacaaacaaggagcaatcatcggatcagaaa
tttgagaagctgaatgctgctttacgcattagttgcttgaggggctaccctgtcagggtt
gtgcggtcgcacaaagagaagcgttcctcgtatgctcctgaatctggtgtgaggtatgat
ggaatttacagaattgagaaatgttggaggaagattggtattcagggtaagttcaaggtc
tgcaggtatctctttgtacgctgtgataatgaacctgctccatggaccagcgatgatcat
ggtgaccgtccaaggccattgccgaagataaaagagctgcaaggtgcaactgatataaca
gagaggaaaggacgcccttcatgggactatgttgagaaagaaggctggaaatgggtggtg
cctccgccaatcagcaagaagcccgttctctctggggatcctgagactgacaaacgaatc
cggagagcaacaaagcgtgctcatatgtctgtggctgagaggctactgaaagagtttgct
tgttctatctgccgggtggtgattaaagaaccccttactactccttgtgctcacaacttt
tgcaaggcttgtttgcttggggcatatgatagccaggcgtctatgagggaaagaagccgt
ggtggtcggaccttaagggcacagaagattgtgaagaaatgcccttcctgcccaaccgac
atctgtgacttcctagaaaatccccagatcaaccgagaaatgatggagctgatcgagtct
ttgcaacgcaaggctgttgaagaaggtgacaccaaggtggcttcagatgatcctgaggaa
tgtggtgatggcgagtcagagggaaatgatggtgctttggcaaaggaagaggatgaaagc
agcatgaatgaggatgagcaagacagtgctgatgctgatggctctgtgaaaattgtggtt
gaaatcaaggaggaaggaaaagatgataagaagaccaagatggatgtgactgaagtggtg
gatgtgttagttgaagaaaaggctgtgaaagagacaaagaagcgcaagggtgatgttgag
actggcacagatggtgcccctgctaaaaggatgaagaagaacattgctgctgtggaagag
gctacttgcactccagtgaaacggatcaggaagagtggtgatgtggatagtgaaggtaat
ggtagtcctgttgtgagcagtggccgcagggtgactcggagcagtgcaaatgctagtgaa
gctgatgatagtccggcaaggaggaccagaagccgtaccagagctgatgctggttgctga
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