Panicum hallii (Hall's panicgrass): 112884578
Help
Entry
112884578 CDS
T07366
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112884578
Spliceosome [BR:
phai03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112884578
Other components
Complex C specific factors
112884578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
112884578
NCBI-ProteinID:
XP_025805779
LinkDB
All DBs
Position
3:62535873..62538661
Genome browser
AA seq
844 aa
AA seq
DB search
MAEEAEGMDRFDMDGDFEGGQFGRDGEFYYRSRRERAPQTRDDAIYGVFAEGDSDYDSED
DDGSRRRGRRKRRRDGGGEPDLTKPVQFVSTGKFMPTQEPEAEPDKRPGLGRAAAAAAKE
EEAEEEEQDDEGDTEMLPTMFGRIREGARARREEKEREREKAARRRQAAGMGAGEPAAAL
GSLEANSKVAKMMAMMGYKKGMGLGKNEQGITAPVETTLRPKNAGLGSVEGFKEPKPMTS
KENLPVPAPPPTSGKKEKRWSKKASTKKAPVLTKNELLAMRAEQEQEEEPAVVQKVIDMR
GPQARVLTDLKGLNEEQEMEANDVPMPELQYNVRLLVDEAKADVLRLHGQLRREQEKVAS
LVREKENVAKQEALQKHQLQVMERIAETLERVRVDDTAGMLTLDGLLQTFHGLKVQFEEE
FKMCSIAWIACRYAHPLLIRIFQGWQPLQDPKFGLDVMKKWKDLLQGDQPYDFSDGSASM
TPYVQLVSEVILPAVRISGTNSWEAREPEPMLNFLELWDNKKLLPPVLLQSILEHVIMPK
LSAAVDSWDPRRESVPIHVWVHPWLPMLRERIETLCHSIRYKLSTVLHVWQAHDASAYAV
LSPWKDVFDSASWEDLIVRYIIPKLRLALQEFQINPANQKLDQFNWVMLWASAIPVHLMV
HMLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDM
MNQAAEGLEVVQPGARENVGYLRATEKRQFDAAQQAYHAAPGAAMADLSFKESIQAYAME
QGLLFMPRVGKFYNGMPVYEFGTVSICIDSVKRLLYAQLQEGIERWSAVTLTQLMEMNRM
GRSR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggaggggatggaccggttcgacatggacggggacttcgagggcggg
cagttcggccgcgacggggagttctactaccggagccggagggagcgggcgccgcagacc
cgcgacgacgccatctacggggtgttcgcggagggcgactccgactacgactcggaggac
gacgacgggtcccgacgccgcggccgccggaagcgccgcagggacggcggcggggagccg
gacctcaccaagcccgtccagttcgtatccaccggcaagttcatgcccacccaggagccg
gaggccgagcctgacaagaggccggggctcgggcgcgccgccgcggctgctgccaaggag
gaggaggcggaggaggaggagcaggacgacgagggggataccgagatgctgccgacgatg
ttcggcaggatcagggagggcgcccgtgcgaggcgggaggagaaggagcgggagcgcgag
aaggcggcgcgccggcgccaggctgccgggatgggggcgggggagccagcggcagccctt
gggagcctggaggctaattccaaggtggccaagatgatggccatgatggggtacaagaaa
ggaatgggccttggaaagaacgagcaggggatcacagcgccggtggagaccactttgcga
cccaagaacgctggcctggggagtgtggagggtttcaaggaacccaagcctatgacgtct
aaggaaaacttgccggtcccggctcctccgccgacatcagggaagaaggagaagcgttgg
tccaagaaggctagcacaaagaaagctccagtcttgacgaagaatgagctcctggccatg
cgtgccgagcaggaacaggaggaggagcctgcagttgtccagaaggtgattgacatgcga
gggccccaggcgcgggtgctgacggacttgaaggggctcaatgaagaacaagagatggag
gcgaatgatgtgccaatgccggagctgcagtacaatgtgcgcctgcttgttgatgaggct
aaggctgatgttctgaggttgcatgggcagctgcgaagggagcaggagaaggtggctagc
ctggtgcgggagaaggaaaacgtggccaagcaggaggcattgcagaaacaccagctgcag
gtgatggagagaattgcagagacactagagcgggtccgtgtggatgatacagctggcatg
ctcactctggatggattgcttcagacattccatggcttgaaggtgcagtttgaggaggag
ttcaagatgtgcagcattgcatggattgcttgcagatatgcccatccactgctaatccgg
atcttccagggatggcagcctcttcaggatccgaagtttgggttagatgtcatgaaaaag
tggaaggacctgctgcagggggaccaaccatatgacttctcagatggttctgcatcaatg
acaccatatgtgcagcttgttagtgaagtcatcctgccggctgtgaggatatcaggaacc
aattcatgggaggctagggaaccggaaccaatgctcaactttcttgagttatgggataat
aagaaattgcttcctcctgttttgcttcaatcaatactagagcatgtgataatgccaaag
ctctcagctgctgtggattcatgggaccctcgcagggagagtgtaccgatccatgtctgg
gtacacccatggttgccaatgctaagagaaaggatagagaccttgtgccattctattcga
tacaagctgagcactgtcctccacgtatggcaagcacatgatgcttcggcatatgctgtg
ctgtccccgtggaaggatgtgtttgattcggcaagctgggaagacctgattgtgcggtat
atcattcctaaactgagattggcactgcaagagtttcagatcaacccagcaaaccagaaa
cttgatcaattcaactgggtgatgttgtgggcatctgcaatcccagtacacctcatggtc
catatgttggaggttgatttcttcagtaagtggcaacaggtcctataccattggttgtgc
tcaccaaatcctgatttcaatgagataatgaactggtataagggctggaagggccttttc
ccaccagagttacttgccaatgagcgcatacggatgcttctaaccgctggtcttgacatg
atgaaccaagctgctgaaggactggaggtggtgcaacctggggctagggagaatgtgggt
tacttgagagcaactgagaaacgacaatttgatgcagcacagcaggcttaccatgctgca
ccaggggcagccatggcggatttgagcttcaaggagtctatccaggcctatgcaatggag
caagggctgctgtttatgcctagagttggcaagttctacaatggcatgccggtgtatgag
tttggcaccgttagtatttgcatagactctgtgaagcgactattgtatgcacaacttcaa
gagggaattgagagatggagtgctgtaactcttacacaattgatggaaatgaaccgaatg
ggaagatcacgctaa
DBGET
integrated database retrieval system
