Panicum hallii (Hall's panicgrass): 112884586
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Entry
112884586 CDS
T07366
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
phai03012
]
112884586
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
eIF-5
112884586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
112884586
NCBI-ProteinID:
XP_025805796
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All DBs
Position
3:9935734..9941907
Genome browser
AA seq
1295 aa
AA seq
DB search
MGRKKNVAIDDDEYSFPQDDAGADPAPPPPAAEKEKPKKGGKKVKKGGKAAAPDDDDDYE
PPPPPPAADEEDDDEPVNLVFTGKKKKKKGAAAPAASFSAFNALEDQDEEEAAAAEPEAT
VDADADADADDDDLDFDFSKAKKKKKKKDKVARSALAKDEDDEPAPPAPSMADEEDEDPS
VAAAAAAKKPQKKKKKKGTFATDDEDIVKILAEMEDHPQPADEPEPEEVKAQGSVPAPDA
DDAAGKKSKKKKKKGGFMMDGEDADQILAQTEDHPPPVEEPQPNDMKDEAPIAAPAPAPA
PVDDAEGKKSKKKKKKSGRTAQEEDELDKLLAELDGPPAEKEDKPVQAPQSASVAKEDVG
AAEDGNVDDKTGEGGEVESAAAKKKKKKKEKEKEKKAAAKGAEAKKEEEKEQEVPKGKVD
MKKLPKHVREMQEALARRKEAEERQKREEEERLRKEEEERLRREEEERKAEEAKRRKKEK
EKEKLLKKKQEGKLLTGKQKEEAKRLEAMRRQFLEQSELQKAEGTAPETKKRPIYDSKKK
KAQPKTTETAKVVEEQQEEVNEAINDEEEYVLVDQESQSQVEESEEKTEPDQEAEEPKPE
EEEEEDEDEWDAKSWDDIDVNLPKTSAFDEEEAKPVVKKSEPVQKQENSKAQPAITSVKK
VVPPVANSKKSETDDGGASNGNLKRNKKKGPVKEDSSKNGSDLRSPICCILGHVDTGKTK
LLDCIRRTNVQEGEAGGITQQIGATYFPTENIRERTRELKADATLKVPGLLVIDTPGHES
FSNLRSRGSSLCDIAILVVDIMHGLEPQTIESLNLLKSRDAVFIVALNKVDRLYGWKKCT
NAPIVKALKQQNEDVKREFNMRVTDIVTQFKMQGVNTALYYKNKEMEDTFNIVPTSAVSG
EGIPDLLLLLVQWAQKTMEEKLTFVDEVQCTVLEVKVVEGHGTTVDVVLVNGILHEGDQI
VVCGMQGPIVTTVRALLTPHPMRELRVKGNYLHHKEIRAAQGVKISAQGLEHAIAGTALY
VLGPDDDLDKLKDAVMEEMTRVRSRIDKSGEGVYVQASTLGSLEALTEFLKSPAVNIPFC
DFSIGPVHKKDVMKASVMLERKKEYATILAFDVKVMPDARDLAEETGVKIFVADIIYHLF
DQFTAYIKNLKEEKKKESAEEAVFPCVLKIMPNCVFNKKDPIVLGVDVLEGIAKVGTPLC
IPTKEFIDIGKIASIEINHKQVDMATKGQKVAIKIIANNSDEQQRSFGRHFDMEDELVSR
ISRRSIDILKQNYREDLSMEDWKLVVKLKTILKIQ
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagaagaacgtcgccatcgacgacgacgagtactccttcccgcaggacgac
gccggcgccgaccccgcgccgccgccgcccgccgcggagaaggagaagcccaagaagggc
ggcaagaaggtcaagaaggggggcaaggccgccgcgcccgacgacgacgacgactacgag
ccccctccgcccccgcccgccgcggacgaggaggatgacgacgagcccgtcaacctcgtc
ttcaccggcaagaagaagaagaagaagggcgccgccgcccccgccgcctccttcagcgcc
ttcaacgcgctcgaggaccaggacgaggaggaagccgccgcggccgagccggaggccacc
gtcgatgccgacgccgacgccgacgccgacgatgacgacctcgatttcgacttcagcaaa
gccaagaagaagaaaaagaaaaaggacaaggtagctcgctctgcgctcgctaaagacgag
gacgacgagcctgctccgccggctccatccatggctgacgaggaagatgaggatccctcg
gtcgctgccgcagcagctgcaaagaagccacagaagaagaagaaaaagaagggtacgttt
gccacggacgatgaggatatcgttaagatcctggctgagatggaggatcatcctcagcct
gcggatgagcctgagccggaggaggtgaaagctcagggttctgtgcccgcccctgacgca
gatgatgccgccggaaagaaatcaaagaagaagaaaaagaagggaggatttatgatggat
ggtgaggatgcagaccagatcctcgcgcagacggaggaccacccgcctcctgtcgaagag
cctcagcccaatgacatgaaggacgaggcccctattgctgcccctgcccctgcccctgcc
cctgtggatgatgctgaagggaagaaatcaaagaagaaaaagaagaagagcggaaggaca
gcacaggaagaagacgagttggacaagcttcttgccgagcttgacggccctcctgcggag
aaggaggacaagccagtgcaggcaccccaatccgcctcagtggccaaggaggacgtggga
gctgcagaggatggtaatgtggatgacaagactggggaaggaggagaggtggaatctgct
gctgccaagaagaagaagaagaagaaggagaaggagaaggagaaaaaggcggcagcaaag
ggagcggaggctaagaaagaagaggagaaggagcaagaagtgcctaaagggaaggttgac
atgaagaagctccctaaacatgttcgggagatgcaggaggccctcgccaggaggaaggaa
gctgaggagagacagaagagagaggaggaagagcgactgaggaaggaggaggaagagcgg
ctgcggcgcgaggaggaggagaggaaagcagaggaagcaaagaggaggaagaaggagaag
gaaaaggagaagttgctcaagaagaagcaggagggtaagctcttgactggcaagcaaaag
gaggaagcaaagaggttggaagccatgaggagacagttccttgagcagagtgaactccaa
aaggctgagggcactgcgcctgagacgaagaagaggccaatatatgattctaagaaaaag
aaagctcaaccaaagaccacagagactgcaaaggttgttgaagaacaacaggaagaggtt
aatgaagctatcaatgatgaagaagaatatgtgctcgtggatcaggaatctcaatctcag
gtagaggagtccgaggagaaaaccgaacctgatcaggaggctgaagagccaaaaccagaa
gaggaagaagaggaagatgaggatgagtgggatgcaaagagctgggatgatattgatgtg
aacttgcctaagacaagtgcttttgatgaggaagaggcgaagcctgttgtcaagaagtcc
gagcctgttcagaagcaggaaaattctaaagcacagcctgcaataacttctgtcaaaaag
gttgtccctcctgttgcaaactctaaaaagagtgaaactgatgatgggggtgccagtaat
ggaaatttaaagcggaacaaaaagaaaggacctgtcaaagaggatagctctaagaatggt
agtgacctcagatcaccaatttgctgcatccttggtcatgttgatactggtaagacaaag
cttctagattgtattagacgcaccaatgtgcaagaaggcgaagctgggggtattacccaa
cagatcggggcgacatacttccctactgaaaacattagagagaggaccagggagttgaaa
gctgatgctacacttaaggttccaggcctgcttgttattgatacccctgggcatgagtcc
tttagtaatctgcgttctagaggttcaagtttgtgtgatattgccattttggtcgttgac
atcatgcatgggcttgaacctcagacaattgaatccctgaatcttttgaagagtcgagat
gcagtgtttattgttgctttgaataaggttgatcgtctttatggttggaagaaatgtaca
aatgctcctattgtgaaggctttaaagcaacagaatgaagatgttaagagggagttcaat
atgagagttacagatattgtgacacaattcaagatgcaaggagtgaatactgctttgtac
tacaagaacaaggagatggaagatacctttaacatagtgcctacaagtgctgtaagtggt
gaaggcattcctgatttgctccttctgttggttcaatgggcacaaaagacgatggaagaa
aagcttacttttgttgatgaagtccagtgtactgtactggaagtcaaggtcgtggaaggt
catggtactacagttgatgttgttttggtcaatggtatactgcacgaaggagatcaaata
gttgtttgtggcatgcagggacccattgtgacaactgtcagagctttgttaacaccacac
ccgatgagagagcttcgagttaagggcaactacctacatcataaggagatcagagctgca
caaggagttaaaatatctgctcagggtctcgaacatgcaattgcagggacagctctttat
gtgttaggacctgatgatgatctagacaaactgaaggatgctgttatggaagagatgaca
cgggttaggagtcggattgataaaagtggtgagggtgtctatgtacaggcatctaccctt
gggtctttggaagctctcactgagttcttgaagagccctgctgtcaatattcccttctgt
gatttcagtatagggccagtccacaagaaggatgttatgaaggctagtgttatgcttgag
agaaagaaagaatatgcaactatcttggcctttgatgtcaaagtgatgcctgatgcccgc
gatcttgcagaagagaccggtgtgaagatctttgtagcagatataatataccacctcttt
gaccaatttacagcgtacattaagaatctcaaggaagaaaagaagaaggaaagcgctgaa
gaagctgtgttcccttgtgttcttaagattatgccaaactgtgtcttcaacaagaaggat
ccaattgttttgggtgtcgatgtccttgaaggaatagctaaggtgggaactcctctctgc
atacccactaaagaatttattgatattgggaagattgcctcaattgaaattaatcacaag
caagttgatatggccacgaaagggcaaaaggtggctataaagattattgcaaacaattct
gatgaacagcagaggagtttcggcagacattttgatatggaagatgagcttgtaagccgg
atctcaaggcgatctattgatattttgaaacaaaattacagggaggacctgtctatggaa
gactggaaacttgttgtaaagttgaaaacaatattgaagatacaatga
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