Panicum hallii (Hall's panicgrass): 112884792
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Entry
112884792 CDS
T07366
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00531
Glycosaminoglycan degradation
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112884792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phai00536
]
112884792
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
112884792
Glycosaminoglycan binding proteins [BR:
phai00536
]
Heparan sulfate / Heparin
Enzymes
112884792
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112884792
NCBI-ProteinID:
XP_025806147
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All DBs
Position
3:60759980..60763922
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AA seq
540 aa
AA seq
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MNLWFIFLLPLLCLPARVRSEDYSDVTVIVRGSETIASTSDEFICATIDWWPPEKCNYDQ
CPWGRASVLNLDLTNPLLGKAIQAFSPLRIRVGGSLQDQVLYGTPNLGSPCDPFTKVSGG
LFGFSQGCITLERWDAINDLFLNTGAVVTFGLNALQGRRQISRSVWGGPWNSSNAREFME
YTVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDLVELQTIINELYGDSRKPLVVAPGG
FYDQKWFAQLLEVSGPNVLNAMTHHIYNLGAGNDPQVPNRILNPQYLSRTSDTFRSLQLT
IQRHGPWSAPWVGEAGGAYNSGSRLVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGN
YGLLDTDTFVPNPDYYSALLWHRLMGTGVLSTDISGSSYLRAYVHCGKQKGGVTLLLLNL
HRSMGFMVSVRNDLNVNLAEGQGIRRDNVFVHGLKRTVSWVGSKASDGHSKREEYHLSAK
DGNPFARTMLLNGVPLELTEDGDIPPLYPVEVSVNSPIYVAPLTIAFVVFPDFEAEACGP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatggtttatctttctcttgcctcttctctgtctgcctgcacgggttcgatca
gaggattactcggatgtgactgtaattgttcgaggctctgagacaattgcttcaaccagt
gatgagtttatctgcgccaccattgattggtggcccccagagaagtgtaactatgaccaa
tgtccatggggaagggcttctgtcttaaatttggacttgactaatcctttgttgggtaaa
gctattcaagcctttagcccactgcgaatcagagtcggaggctccttacaagatcaggtg
ctatatggcacaccaaatttgggatctccatgcgatccatttacaaaggtttcaggtggt
ctgtttgggttttctcaaggatgcataaccttggaaagatgggatgctattaatgatctg
ttcctgaatacaggtgcagttgttacatttggtcttaatgcacttcaaggacgacggcag
ataagcagaagtgtttggggaggtccttggaattcgagcaatgctagagagttcatggaa
tacacagtttcaatgaactatcccatagattcttgggaatttggtaatgaattgagtgga
agtggaattggtgcgagtgtgggagctgaacaatatggaaaggacctagttgaactccaa
acaatcatcaatgagttatatggagattccaggaaaccactggttgtagccccaggagga
ttttatgaccaaaaatggtttgctcaacttcttgaggtctctgggccaaatgttctcaat
gcaatgactcatcatatttacaaccttggtgctggtaatgatccacaagttccaaatcga
attttgaacccacaatatttgagccggacttccgacacattcagaagtctccaactcaca
atacaacgccatggaccatggtctgctccatgggttggggaagctggtggcgcatataac
agcggcagccgtctcgtgtctaatactttcctgaatagcttctggtatcttgatcaactt
gggcaatcagcaaagtatgacaccaaggtttactgcagacagactctgattggtggcaat
tacgggctccttgacactgacactttcgtaccaaacccagattactacagtgccttgctg
tggcatcggctcatgggaacgggagttctttccacagacatcagtggttcttcatacttg
cgtgcttatgttcattgcggaaagcagaaggggggcgtcacactcctcttgttgaacctg
caccgaagcatgggattcatggtttcagtcaggaacgacctcaatgtcaatctcgcagag
gggcaagggatcagaagggacaatgtgtttgtccatggccttaaaaggacggtttcttgg
gttgggagcaaagcttcagacgggcattccaagagggaagagtaccatctctcggcgaaa
gatgggaacccctttgcccggaccatgctcctgaacggagttcctctagaactcactgaa
gatggtgatatccctccattgtatcctgtggaagtttcagtcaattcaccaatctatgtt
gctcctctgaccattgcgttcgtcgtgttcccagacttcgaggctgaagcttgtggtcca
tga
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