Panicum hallii (Hall's panicgrass): 112884794
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Entry
112884794 CDS
T07366
Name
(RefSeq) F-box/LRR-repeat protein 3-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112884794
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112884794
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_8
LRR_Zer-1
LRR_EndoS
LRR_14
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
112884794
NCBI-ProteinID:
XP_025806149
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All DBs
Position
3:278485..282119
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AA seq
683 aa
AA seq
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MAAAAAHRNNKRRRLSLAPGPTSATAPPLDSLADELLFLVLDRVAAADPRALKSFALASR
ACHATESRHRRLLRPLLADLIPAALARYPSASRLDLSLCARVPDAALAAAPSGSSLRAVD
LSRSWGFGAAGLAALAGACPDLADLDLSNGVHLGDAAAAEVARMRTLQRLSLSRCKPLTD
MGLGCVAVGCPDLRELSLKWCLGLTDLGLHLLALKCKKLTSLDLSYTMITKESFLAIMKL
PNLQVLTLVGCIGIDDDALGSLEKECSKSLQVLDMSHCQNITDVGVSSIVKSIPNLLELD
LSYCCPQVTPSMGRSLQKITKLRMLKLEGCKFMADGLKAIGSSCVSIRELSLSKCSGVTD
TELSFAVSKLKNLLKLDITCCRNITDVSVAAITSSCTSLISLRMESCSHVSSGALQLIGK
NCSHLEELDLTDSDLDDEGLKALAGCSNLLSLKIGICLRISDEGLMHIGKSCPKLGDIDL
YRCGGISDDGVIQIAQGSPMLESINLSYCTEITDRSLMSLSKCTKLNTLEIRGCPRVSSA
GLSEIAMGCRLLSKLDIKKCFEINDVGMLYLSQFSHSLRQINLSYCSVTDIGLLSLSSIC
GLQNMTIVHLAGITPNGLTAALMVCGGLTKVKLHEAFKSMMPPHMLKNVEARGCIFQWIN
KPFKVEVEPCDVWKQQSQDVLVR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcagcagcccaccggaacaacaagcgccgccgcctctccctggctcccggc
cccacctccgccaccgcgccccctctggactcgctcgccgacgagctcctcttcctcgtc
ctcgaccgcgtcgccgccgccgacccgcgcgcgctaaagtccttcgccctcgcctcccgc
gcatgccacgccaccgagtcccgccaccgccgcctcctgcgcccgctcctcgccgacctc
atccccgccgcgcttgcccgctacccgtccgcctcccgcctcgacctctccctctgcgcg
cgcgtccccgacgccgccctcgccgccgccccatccggatcatccctccgcgccgtcgac
ctctcccgctcatgggggttcggcgccgcgggcctcgccgcgctcgccggggcctgcccg
gacctcgccgacctcgacctctcgaatggggtccatcttggggacgccgcggcggccgag
gtggcgcggatgcggaccctccagaggctgtctctctcgcgctgcaagccgctcacggac
atggggctcggctgcgtcgccgtcggctgccccgacctcagggaactctcgctcaagtgg
tgccttgggctcaccgatttggggctccacctcctcgccctcaagtgcaagaaactcacc
agcctggatctctcctacaccatgatcacaaaagagagctttcttgccatcatgaagcta
cccaatctccaggtgttgacactggtggggtgtattggaattgatgatgatgctcttggc
agtcttgaaaaagaatgcagtaaatcactacaggttcttgatatgtctcattgtcagaat
atcactgatgtgggagtttcatccatagtgaagtcaataccgaatctactggaactggat
ctttcatactgctgtcctcaggttactccttctatggggagaagtctccaaaagattact
aaactgcggatgctgaagctggaaggctgcaaattcatggctgatggactaaaagccatt
ggaagctcttgtgtttctatcagggagttaagtctgagcaagtgctctggagtaacagat
actgaactctcttttgctgtgtcaaaactaaagaacctgctgaagctggacatcacttgt
tgtcgcaatatcactgatgtttcagtagctgccatcactagttcatgcacttccctcatc
tctctgaggatggagtcttgtagccatgtttcaagtggagcactccaactgatcgggaag
aactgttctcacttggaagagttggaccttactgacagtgatttggatgatgaagggttg
aaagctctcgccggatgcagcaatctcttgagcctaaaaattggtatttgcttgaggata
agtgatgaaggtctgatgcacattggaaaatcttgcccaaaactcggagacattgatttg
tacaggtgtggaggcattagtgatgatggggttattcagattgctcaaggcagtccaatg
ctagaatctatcaatctatcctactgtacagaaataacagaccgttcactgatgtccctc
tcaaaatgcacaaagctaaatacattggagattcgtggctgccccagggtttcatctgct
gggctctcagaaatagcaatgggttgcaggctgctttccaagcttgatatcaagaaatgc
tttgagattaatgatgtgggcatgctctacctttcccagttctctcatagcctccgtcag
ataaacttgtcatactgttcggtcaccgacattggacttctttcactttctagcatatgt
ggcttgcagaacatgaccattgtacatttagcgggtattacacctaatggcttgacagct
gctctcatggtctgtggtggtttgacaaaagtgaagcttcatgaagcattcaaatccatg
atgcctcctcatatgctaaaaaatgttgaggcgcggggttgtattttccagtggatcaat
aaaccatttaaggttgaggtggaaccttgtgatgtgtggaagcagcagtcacaagatgtt
cttgtacgatga
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