Panicum hallii (Hall's panicgrass): 112884864
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Entry
112884864 CDS
T07366
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112884864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112884864
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112884864
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Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
LRR_14
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
112884864
NCBI-ProteinID:
XP_025806260
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Position
3:complement(18247831..18252186)
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AA seq
369 aa
AA seq
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MVSGRPENGELDAWFKSLMVSSSNQRGQAESGGPLPTLSGWKDLPVELLLRIISIVGDDR
MVIVASGVCTGWRDALGWGVTNLSLSWCKQNMNSLMISLAHKFTKLQVLTLRQNKPQLED
SAVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPRLTRLNISGCSNFSDTALTYLTC
RCKNLKCLNLCGCVKAVSDRALQAIAQNCGQLQSLNLGWCDNITDKGVTSLASGCPDLRA
VDLCGCVLITDESVVALANGCPHLRSLGLYFCQNITDRAMYSLANSRVKSKRGRWDAVKD
GLANLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTSVHCACALHPHRAG
RALLPNHAY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcggaaggcctgagaacggtgaattggatgcatggttcaagagcctcatggtt
tcctcaagcaaccagagggggcaggctgaaagtggtggtccgttgcctacattatcagga
tggaaggaccttccagtggagctgctgttgaggataatatcaattgttggagatgacagg
atggtcattgtggcttctggtgtttgcacgggctggcgtgacgccctgggatggggagtt
actaatctttccctctcatggtgcaagcagaacatgaatagtttaatgatatctcttgct
cacaagtttacaaagttacaagttctcactcttcgccaaaacaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgtcatgatctacgtgagttggacctcagcaga
agcttcaggctgagtgaccgctccttgtatgccttggcccatggatgcccacggcttaca
agactgaacattagcggatgctccaatttcagtgacactgccttgacttaccttacttgc
cgctgtaaaaacctgaagtgcttgaatttgtgtggatgtgtgaaggctgtaagtgataga
gctttgcaggccattgctcagaactgtgggcagctgcaatctttgaacctaggctggtgt
gacaatattacagataagggagtgaccagcttagcgtcaggatgtcctgatctcagagct
gtagacttgtgtggttgtgttcttataacagacgagagtgtggttgctcttgctaacgga
tgcccgcacctgcggtcgttaggcctctacttctgccagaacatcacggaccgtgccatg
tactccctcgcgaacagccgagtgaagagcaagcgcgggaggtgggacgcggtgaaagat
gggcttgcgaacctcaacatcagccagtgcacggccctgacgcccccagcagtgcaggcg
gtctgcgactcctttccggcgctccacacctgccctgagaggcactccctcatcattagc
ggctgcctcagcctcacgtcggtccactgcgcctgcgccctgcaccctcaccgcgccggg
cgagccctcttgcccaaccatgcgtactga
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