Panicum hallii (Hall's panicgrass): 112884899
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Entry
112884899 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112884899
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112884899
Enzymes [BR:
phai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112884899
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112884899
Prokaryotic type
112884899
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
112884899
NCBI-ProteinID:
XP_025806311
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All DBs
Position
3:complement(5702604..5706973)
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AA seq
494 aa
AA seq
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MPPPGAMAAAAAALLPSSSSPLLRLPRRFLSLTATPYPLYYDLIVHRPADPKPPKASSDA
SADRQPQPTPDEQPLDRAKRRYLRKRRSRLLPDPDASAKPSASSSSEFVELQPEVVDFPR
LHAREEALYFHDTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNAFVPADAGPPSDADRGLV
FFDDEKKEDDGEDRVANKKEGDNDKGEVLERKVEDFFRSLRKPPGEASTKAKRPAAAGAE
PRQVKREVPREEERPQPYLVTRTTDLPPRWDGPAGTVVLIDKPKGWTSFTVCGKLRRLVK
VQKVGHAGTLDPMATGLLIVCVGKATKIVDSYQGMVKGYSGVFRLGEATSTWDADSPVIQ
REPWEHIKDEDIRKAAASFKGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRRISIY
QFDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTALRRESIGEYSVNDAW
NFDELEEQITKAYL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaccgggagccatggcggcggcggcggcggcgctgctgccctcctcctcgtcg
ccgctgctccgcctcccacgccgcttcctctcgctcaccgcgactccctacccgctctac
tacgacctcatcgtccaccgccccgccgaccccaagccccccaaagcctcctccgacgcc
agcgccgaccgtcagccgcagccaacccccgacgagcagccgctcgatcgcgccaagcgc
cggtacctccgcaagcgccgcagccgcctcctcccggacccggacgcctccgccaagccc
tccgcgtcctcctcgtcggagttcgtggagctccagccggaggtggtggacttcccgcgg
ctgcacgcgcgcgaggaggcgctctacttccacgacaccttcgccatgccgtgggagaag
gacaagcactaccgcatgctctaccgcctcgagaagaagtacttccctcaccagtcgctg
gacaacgcattcgtccccgcggacgccgggccgccctccgacgccgacaggggcctcgtc
ttcttcgatgatgagaagaaggaagatgacggagaggaccgggtggccaataagaaggaa
ggcgacaacgacaaaggggaggtgctggagaggaaggtggaagacttcttcaggtctctg
aggaagccccccggcgaagccagcacaaaggccaagagaccggcggcagcaggagcggaa
ccgcggcaggtgaagcgcgaggtgccaagggaggaggagcgcccgcagccgtatctcgtg
accaggacgacggacctgccgccgaggtgggacgggccggctgggaccgtcgtgctcatt
gacaagcccaaaggatggacttcatttactgtttgtggaaagttgaggcgcttagtgaag
gtgcaaaaggttggacatgctggtactctggaccccatggcaactggattgttgattgtt
tgtgtaggaaaagcaaccaaaatagtcgatagctaccaaggaatggttaaaggttatagc
ggtgttttccgacttggagaagccacatcaacctgggatgcagattcaccagttatccag
agggaaccatgggaacacatcaaagatgaagacattagaaaggcagcagcatcattcaag
ggtgagatatggcaagttcctccgatgttttctgccattaaggttggtggtgaaaagatg
tatgacaaagcaaggaggggtgaaacagtagagctttcaccaagacgcatatcgatatac
cagtttgacattgagcgcagtttggaagacagacagaatttgatatttcgggttacttgc
tcaaaagggacatatattcggtccctgtgtgcagacttggggaaagcacttggaagctgt
gctcatttaactgccttgcggagagagtcaataggtgaatactcagtcaatgatgcttgg
aacttcgatgagcttgaagaacaaattaccaaggcatatttatga
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