Panicum hallii (Hall's panicgrass): 112884927
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Entry
112884927 CDS
T07366
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112884927
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112884927
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
P_C10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
112884927
NCBI-ProteinID:
XP_025806355
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All DBs
Position
3:17707498..17712330
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AA seq
478 aa
AA seq
DB search
MAEPSKVIHIRNVGHEIAESDLLQLLQPFGLVSKIVMLRAKNQALLQMEDIHASVSALQY
YSSVQPSVRGRNVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVL
HQVFKAYGFVEKIVTFQKSAGFQALIQYNSRQEAVEAFGSLHGRNIYDGCCQLDIQYSNL
SELQVHYNNDRSRDFTNPSLPTEQRPRTSQQQGYPDPASLYAFQQPGASYAQMGRAAMIA
AAFGGTLPHGVTGTNERCTLIVSNLNTDKIDEDKLFNLFSLYGNIVRIKILRNKPDHALV
EMADGLQAELAVHYLKVHSDSPVLFSIAFLSSVHICDYCLLFGMPIFLQGAILFGKKLEV
NYSKYPNITPAPDAHDYLNSSLNRFNSNVVKNYRHCCAPTKMIHISALPQEISEEAILNH
VSEHGSVINTKLFEVNGKRQALVMFETEEAATEALVSKHASTLEGNTIRISFSQMQSI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgtccaaggtaatccacatccgcaacgttgggcacgagattgctgagtct
gatctactccagctgttgcagccgttcgggctggtctccaagattgtcatgctgcgtgcc
aagaaccaagctcttctgcagatggaagacatacatgcctctgtgagcgcgctgcaatat
tacagttctgttcaacctagtgtaaggggaaggaatgtatacatgcaattctcatcccac
caagaacttaccacagaccagagctcccatggaaggaattctgatcaagagtctgaaccc
aaccgaatcctcttagttactatccaccacatgatctatcctataacggtggaggttcta
catcaagtattcaaagcttatggatttgtggagaagatagtcacatttcaaaagtcagct
ggttttcaagctcttattcagtataactcgcgccaagaagctgtggaagcatttggttct
ttgcatggaagaaacatatatgatggttgctgccagctagacattcaatattcaaacctc
agtgaactgcaagtccactacaacaatgaccggtctagggattttacaaatccatcattg
cctacagaacagcgtcctaggacctctcagcagcaaggttatcctgatccagctagtctc
tatgccttccaacaacctggagcttcgtatgcacagatgggaagagctgcaatgattgcg
gctgcgtttggtggaacgttacctcatggagtgactggtaccaatgaacggtgcacgctc
atagttagtaatttgaacactgacaaaattgacgaggataagcttttcaatctgttttct
ttgtacggaaacatagtacgaatcaagatattgcgtaataaaccagaccacgccctagtt
gagatggctgatggtttgcaggctgagctagctgtgcattatctaaaggtacattcagac
tcaccggttctcttctcaatcgcattcttatcttctgttcacatctgtgactattgtctt
ctatttggaatgcctatatttttgcagggcgcaattctatttgggaagaaactggaagtt
aactactcaaagtaccccaacattacgcccgcccctgacgcacatgactacttaaactca
agccttaaccggttcaacagcaacgtggtcaagaactacagacattgctgcgctccaaca
aagatgatccacatttctgccctcccccaagagatctccgaggaagcaatcctcaatcac
gtgtctgagcatggttctgtcatcaacacaaagctgtttgaggtgaacggcaagaggcag
gctctcgtcatgtttgagactgaagaggcggcgaccgaggccctcgtgtcgaaacacgct
agcacactggaggggaacacgatccggatctctttctcccagatgcagagtatataa
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