Panicum hallii (Hall's panicgrass): 112884952
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Entry
112884952 CDS
T07366
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112884952
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112884952
REST complex
112884952
Heterochromatin formation proteins
Other heterochromatin formation proteins
112884952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
DUF1722
Motif
Other DBs
NCBI-GeneID:
112884952
NCBI-ProteinID:
XP_025806385
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All DBs
Position
3:9701266..9709777
Genome browser
AA seq
1357 aa
AA seq
DB search
MAPPAPAPPPQGNLTTSDALTYLKDVKEKFQDRRHKYDEFLEVMRDFKSNKIDTAGVILR
VKTLFHGHSDLILGFNAFLPKGYEIKLEDLDKKPVDFAMAISFVNKIKSRFQQEDHVYKS
FLGILNMYRMHNKPIQDVYEEVATLFHGHPDLLEEFKHFLPENPTPPQAATVSRVRHDEK
NTTMHSARSVQTIKRERAFPPTADPDSSVDRPDPEHVVQRCTEEKNRNACHSQDRRDYET
NDKYDNRELYGRKPQRKVEGTGDDTLGGPSTSPLPFNDNYVLKSSNTQEFHFCEKVKVKL
EPEAYQKFLKCLHIYSQEIITRSELKRLVKDILQHYPDLVNGFNEFLEHCENIDGFLEGI
LKERQTSRTVKTMEKDRDKEHDGQGDPEKERYKERGKPEKASPFNSKEGASHKATAFPSK
EKYNLCKPISELDLSNCQRCTPSYRLLPKNYPMPPASNLTDIGAAVLNDLWVSVTSGSED
YSFKHMRKNQYEESLFRCEDDRFELDILLESVNSTIKRVEELVEKMDKSLKPDSSIHIDE
HLTCLNMRCIERVYGDHGLDVVDVLRKNADVALPVILTRLKQKQEEWSRCQSDFNKIWAE
IYAKNYHKSLDHRSFYFKQQDTKNLSAKVLLAEIKEINEKKRKGDDVLLAVAAGNRRPIV
PNMSFEYVDSDIHEDLYQIIKYSCGELCSSSDQVDKVMRIWTTFLEPILGIQHRGHGTED
AGMVKAKSRARKVGLACGEKRNNATPNGTVAVKPANGDENILKECVQPPRAIFVNEATAD
AQDCSHEGEQTFGRGDDLPNAALHGRVQNTSSAADKVATAQNNSTKGSVGNTDLSPSEKN
QCRANMDLVAGNTTSAGAKAVVEMKGGNETIPSTGKREAGTIKSLYGVGANPFNKYSGSH
NNLKPEREEGELSPNGDFEEENFGVFQVEASDGTSKLKEGSACRPLQGRHKEVVKFAGEN
HDDADDEGDESAQRSTEDSENASEAGEDASGSESGGGEEFSREDHEEEEDDMDPDTNAQS
EGGAEVTDAQDLDVGISLPFSERLHSTVKPLYKYVASTLQNHDDKDTHIFYGNDSFYVLF
RLHQILYERILSAKTNSSTSEKKWKASKDTKSSDQYSKFISALYSLLDGSSDSTKFEDDC
RSIIGTQSYVLFTLDKLIYKVVKQLQVVASDEMDNKLLQLYLYEKSRSPGRFLDLVYHEN
ARVLLHDESIYRFECHSNPTRLSVQLMEYGNEKPEVTAVTFDPTFSQYLYNDYLSSIPDT
KLADDVFLRRNKRKQGGNDDSPASLKTMDNIMFVNGLECKISCKTSKVSYVLDTEDFLFR
MRKRRRAPSSGTMPAKANFAKAYSVKSQEFHRFLSRP
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggcgccggcgccgccgccgcaggggaacctcaccaccagcgacgccctc
acctacctcaaggacgtcaaggagaagttccaggacaggcgccacaagtacgacgagttc
ctcgaggtcatgcgcgatttcaagagcaacaagatcgacaccgccggcgtcatcctccgc
gtcaagaccctgttccatggccactccgacctgatcctcggcttcaacgctttcctcccc
aaggggtacgagatcaagctcgaggacctcgacaagaagcccgtcgattttgccatggcc
atcagctttgtcaacaagattaagagccgattccagcaggaggaccatgtctacaagtca
ttcctcggaatcctcaacatgtaccgcatgcataacaagcccatccaagacgtttatgag
gaggtcgcgacactgttccatggccatcctgatttgcttgaggagttcaagcatttcttg
cctgaaaaccccacgcctccacaggcagccaccgtctctagagtcagacatgatgagaag
aacactacaatgcattctgctaggagtgttcagaccatcaagagggagagagcttttccg
ccaactgctgatcctgactccagtgttgatcgccctgatcctgagcatgttgtccagagg
tgtactgaggagaaaaatcgtaatgcctgccacagtcaggatagaagagattatgaaacg
aatgataaatatgacaatagagagctatatggccgtaaaccacaaagaaaggtggagggt
acaggtgatgatacactaggggggcctagcacctctcctttaccattcaatgataattat
gtactgaaaagttcaaacacacaagagtttcacttttgcgaaaaagtgaaggtgaagcta
gagcccgaagcttaccaaaagttcttgaaatgccttcacatatacagccaagaaataatt
acaagaagtgaattgaaaagattggtaaaggacatacttcagcactaccccgatcttgtg
aatggattcaatgaattcttggaacactgtgaaaacatagatggctttctggaaggaatc
ttaaaggaaaggcaaacatcacggacagttaagactatggaaaaagatagagacaaagag
catgatgggcagggagatcctgagaaagagagatataaggaaaggggaaaacctgaaaaa
gcatcgccattcaattctaaggaaggagctagtcacaaagctactgcattcccaagcaaa
gaaaaatataacttatgcaaaccaatatcagagcttgatctgtcaaactgtcagcggtgc
actccaagttaccgacttttgcctaaaaattatccaatgcctcctgcgagcaacctgact
gacatcggagctgcagtgcttaatgatctctgggtatcagtgacctcaggaagtgaagac
tattcatttaagcacatgcgcaaaaatcagtatgaagaaagcttgtttagatgtgaagat
gacaggtttgagctggacatactgttggaatccgttaattccacaattaagcgggttgaa
gagttggtagaaaagatggacaaatcacttaaaccagacagctctatccacattgatgaa
catttgacttgtctgaatatgaggtgcattgagcgggtatatggtgaccatggacttgat
gtcgtggatgttcttcgcaaaaacgctgatgtggcattaccagttattttaaccaggctt
aaacaaaagcaggaggaatggtcaaggtgccagtcagattttaataaaatttgggctgaa
atatatgcaaaaaattatcacaagtctcttgaccatcgcagtttctatttcaaacaacaa
gatacaaagaatctgagcgcaaaagttctgttggctgagattaaagaaatcaatgagaag
aaaaggaagggggatgatgtgctacttgcagttgcagctggcaacaggcggcctatagtt
cccaatatgtcatttgagtatgtagattcagacattcacgaagatctttaccagatcatc
aaatactcttgtggagaactctgcagttcttcagatcaagttgacaaagttatgagaatc
tggacaacatttttggagcctatattgggtattcaacatcgaggtcatggcactgaagat
gcaggtatggtgaaagcaaagagtcgagccagaaaagttggtttggcatgtggtgagaaa
agaaataatgcaacaccaaatggtacagttgctgttaagcctgccaatggtgatgaaaat
attctaaaggaatgtgtacaacctcctcgtgctatatttgtaaatgaagctacagcagac
gcccaagattgttcccatgaaggtgagcaaactttcggcagaggtgatgacctaccaaac
gctgcactgcatggaagagtacaaaacaccagttctgcagctgacaaagtagctactgca
caaaacaactccaccaaaggatctgtggggaacactgatctttctccaagtgaaaaaaat
cagtgtagagcaaatatggaccttgtagcaggtaatactacctctgctggagctaaggct
gtggttgaaatgaagggtgggaatgaaacaattccatctacagggaaaagagaagctggg
acgatcaaatctttgtatggagtgggtgctaatccatttaataaatattctggttcacac
aacaatttaaagccagaaagagaagagggtgaattatctcctaatggtgattttgaagag
gaaaactttggtgttttccaagttgaagcttcagatggaacttctaaactaaaggaaggt
tcagcctgcagacctctccagggtagacataaggaagttgtcaagtttgctggcgaaaat
catgatgatgcagatgatgaaggtgatgagagtgcccagaggtctacagaggatagtgaa
aatgcatctgaggctggtgaagatgcctctggcagcgaatctggtggtggcgaggaattt
tctcgagaagatcatgaggaagaagaggatgatatggaccctgatacgaatgcccaaagt
gagggtggggcagaggttacggatgcacaagatctggatgtaggaatatcactgccattt
tcagaacgtttgcacagcacagttaaaccactttacaagtatgttgcctccacattacaa
aaccatgatgataaagatacacatatattttatggaaatgattcgttttatgttctgttc
aggctacatcagatcttatatgagagaatattgtcagctaagacaaactcttccacatca
gagaagaagtggaaggcttcaaaggatacaaaatcttcagatcaatattcgaagtttatc
agtgccctatacagcttgcttgatggttcttctgacagcaccaaatttgaagatgactgc
cgctccatcattgggactcaatcctatgttctctttactttagataaactgatatacaaa
gttgtgaagcagcttcaagtagtagcatctgatgaaatggacaacaagcttctccagctt
tatttgtatgaaaagtccaggtctcctgggagattccttgatctggtatatcatgaaaat
gcacgtgtccttctccatgatgagagcatataccgatttgaatgccattcaaatcctaca
agattatctgttcagctcatggagtatgggaatgaaaaacctgaagtgaccgctgtcaca
tttgatccaaccttttcacaatatctttataatgattatctgtcaagtattccagatacc
aaattggctgatgatgtcttccttaggaggaataagcggaagcaagggggaaatgatgat
tccccagcttcattgaagaccatggacaatatcatgtttgtcaatggtcttgagtgcaag
atatcttgcaaaacctcaaaggtttcctatgtccttgacactgaggatttcttatttcgt
atgaggaagaggaggagagctccatctagtggaaccatgcctgcaaaggcaaattttgcg
aaagcttacagtgtaaaatcacaagaatttcatagatttctctccaggccgtag
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