Panicum hallii (Hall's panicgrass): 112884981
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Entry
112884981 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112884981
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112884981
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112884981
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112884981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112884981
NCBI-ProteinID:
XP_025806427
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All DBs
Position
3:complement(42864271..42869919)
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AA seq
848 aa
AA seq
DB search
MDDSCAVCAETLEWVAYGPCGHRDVCSTCVVRLRFVMDDKKCCICKTVCPSVFVTKALGE
YTRVVNDFSVFPTGVNEGKAGDFWYHEDTQAYFDDAEHYKMIRAMCRLSCSVCDNAEDQV
ALAAQAKRRSKFRSIDQLKGHLFHVHRLHMCNLCLEGRKVFICEQKLYSRSQLTQHMKTG
DSEVDGSEVERSGFAGHPMCEFCKSSFYGDNELYTHMSREHYSCHICQRQHPGQYDYFQN
YDDLELHFRKDHFLCEDETCLAKKFVVFPSEAELKRHNAMEHGGRMSRAQRNAALQIPTS
FIYRRNEQDQRRGGGRGRTAHHDGTESYISSSGQNGRATTDNGHVGRVENVSGSLQSLSV
GSSSGGAEVGSRTGRVLEQLSFPPLSDLDIPDTRVDSVPDETSFPSLSEQQSRYALALNQ
SVRGAARLGDESLFPPLPGSSNNRGPASAQQGLQSLAKSTLAARLQQRSKGPVKVLHTAR
PRPSENPELLPSSTQTWPTPDQGLLLPGSSQLRIETQATRENGFMPAASSNSAWNPVAPN
KMKHSVSTPNLVSGGSSGQASSSTAYGRNRSQEPPQGSQALPVAEDVRAANKSLVERMRS
ALGMDEDRYSAFKEIAGEYRQGIIDTSEYLSYVEQFGLSHLVPEMARLLPDPQKKRELAD
AYYTNIRFKSPQENGGGGTSSQEASRKKKGKGKAPVVESGAAKDVKDALADNFLDTVRRL
QSNHQAQEGEAEVLSKDGYRPSKGVQLSAGSSSSLDSDTGFNSKASVAKDNAGKGGGTSS
SNKQPKKTSKFLRARLGDNSLATLDLSRPSASPERPERESQGPKMGLPVRGAWKNGGGQK
LFSSNGRK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcctgcgcggtgtgcgcggaaacgctggagtgggtggcctacgggccgtgc
gggcaccgcgatgtgtgctccacctgcgtcgtccgcctccgcttcgtcatggacgacaag
aagtgctgcatctgcaagaccgtctgcccctccgtcttcgtcaccaaggccttgggtgaa
tacacgagagtggtcaatgatttctctgtgtttcccactggggtaaacgagggcaaggca
ggggatttctggtaccatgaggatacacaggcatactttgatgacgcggaacactacaag
atgatacgagcaatgtgtcggctttcttgtagtgtttgtgacaatgcagaggatcaggtt
gctcttgctgctcaagcaaagcgcagaagtaagttcaggagcatagatcaactgaaggga
catttgttccatgtgcataggttgcacatgtgcaatctttgcttggaggggaggaaggtg
ttcatttgtgagcaaaagctttattcaaggtcccagttaactcagcatatgaaaactggt
gactctgaagtggatggctctgaggtagagcgtagtggttttgctgggcacccgatgtgt
gagttctgcaaaagttcattttatggagataatgagctatacacacatatgtccagagaa
cactattcttgccacatatgtcaacggcagcatcctgggcagtatgactatttccagaac
tatgacgaccttgagttgcattttcggaaagatcatttcctctgtgaagatgaaacatgt
ttggcaaagaagtttgttgtcttcccgagtgaggcggagctcaagagacataatgcaatg
gagcatggtgggcggatgtctcgtgctcagaggaatgctgctcttcagatacctaccagt
tttatatatcgcagaaatgagcaagaccaacggcgtggcggaggtagggggcgtactgct
caccatgatggaactgagagttatatctcatcatctgggcagaatggccgtgcaaccact
gacaatggccatgtgggccgtgttgagaatgtttcagggtctttgcagtccttaagtgtt
ggttctagctctggaggagcagaagttggttcaaggactggacgagtacttgaacagttg
tcctttccacctctttcagacctagatattcctgatactagagttgactctgttcctgat
gaaacctcatttccttcattgtcagagcagcaatccagatatgctcttgctctcaatcag
agtgtaagaggcgctgcaaggttgggggatgagtcattattccctcctttgcctgggtct
agtaacaacaggggtcctgcttcagcacaacaggggctacaaagtctagccaagagcaca
cttgcagcaaggcttcaacagcgtagcaagggccccgtgaaagtacttcatacggctcgg
cctcggccttctgagaatcctgaattgctccctagttccacccagacatggcctacacct
gatcagggactactcctgcctggatcttctcagcttcgaattgaaactcaagcaacaaga
gaaaatgggttcatgccagctgcctccagtaactcggcgtggaatcctgttgctccaaac
aagatgaagcattctgtttccactcctaatcttgtgtctggtggctcctctggccaagcg
tcatcaagtacagcttatggtagaaatagaagtcaagaaccgcctcaaggtagccaagct
ttgcctgttgctgaggatgttcgtgctgcaaacaaatctcttgttgaaagaatgcgttct
gctctgggaatggatgaggacaggtactctgcattcaaagagattgctggtgaataccgt
caaggtatcatagatacttcagagtatctttcatatgtcgagcagtttggactctcgcac
cttgttcctgaaatggctaggctattaccggatcctcaaaagaagagggaacttgctgat
gcatattatacgaacatacggtttaaaagccctcaagaaaatggtggaggtggaaccagc
tcacaagaggccagccgtaaaaagaagggtaagggaaaagctcctgttgtggaaagcggt
gctgctaaagatgtgaaagatgcactagccgataactttctggacactgtaagaaggctt
caatcaaaccaccaggctcaggaaggagaggctgaggtgttgtcaaaggatgggtatcga
ccttccaagggggtccaactatcagctggatcttcatctagtcttgacagtgatactggt
ttcaattcaaaagcttctgttgccaaagataatgctggcaaaggaggaggcactagcagc
agtaataagcaaccaaagaagacatcaaagtttctcagagctcgtttaggtgacaactca
ttagccacacttgatttaagtcgtcctagtgcgagtcctgaacgacctgaaagagaatca
caaggcccaaagatggggttgcctgttcgaggtgcttggaagaatggtggagggcagaaa
ctcttttcgagcaacggaaggaagtag
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