Panicum hallii (Hall's panicgrass): 112884986
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Entry
112884986 CDS
T07366
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112884986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112884986
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112884986
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
F-box_5
LRR_6
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
112884986
NCBI-ProteinID:
XP_025806433
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Position
3:complement(7603959..7609656)
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AA seq
585 aa
AA seq
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MGRGAAAALPPWHALPDEVWEHAFSFLPTDSDRGAAAAACRSWLRAERRSRRRLAVANCY
AASPQDAVDRFPSVRAVEVKGKPHFADFGLVPPGWGAAAAPWVAAAADGWPLLEEFSFKR
MVVTDDCLEMIAASFRNFQVLRLVSCEGFSTAGLAAIAAGCRNLRELDLQENEIEDCSIN
WLSLFPESFTSLVTLNFSCLEGDVNIAVLERLVTRCRNLKTLKVNNSIPLDMLASLLRKA
PQIVELGTGRFSADYHLNLFSKLEAAFAGCKSLRRLSGAWDAVPEYLPAFYSVCEGLTSL
NLSYATVRGPELIKFISRCKNLQLLWVMDLIEDHGLAIVASSCNKLQELRVFPSSPFDAV
EQVSLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCIIEPHTPDY
ITHQPLDAGFSAIVESCKGLRRLSVSGLLTDRVFKSIGAHADRLEMLSIAFAGNSDLGLH
YILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCSLTLGACRQLARKMPRLS
VEVMNDPRRACPLDSLTDESPVETLYVYRTIAGPRSDTPACVQIV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcgccgccgccgcgctgccgccgtggcacgcgctcccggacgaggtctgg
gagcatgccttctccttcctccccacggactcggaccggggcgccgccgcggccgcctgc
cgctcctggcttcgcgccgagcgccgctcgcgccgtcgcctcgccgtcgccaactgctac
gctgcgtccccgcaggacgccgtcgaccggttcccgtccgtccgcgccgtcgaggtcaag
ggcaagcctcacttcgcagacttcggcctcgtgccgcccggctggggcgctgccgccgcg
ccatgggtcgccgccgccgccgacgggtggccgctgctcgaggagttcagcttcaagcgc
atggtcgtcaccgacgactgcctcgagatgatcgcggcctccttcaggaacttccaggtg
ctgcgcctcgtatcctgcgagggtttcagcaccgccgggctcgctgccattgccgccggc
tgcaggaatctaagagaacttgacctgcaggagaatgagattgaggattgctctattaat
tggctcagtctctttccagaatccttcacttctttggtaactctaaatttttcatgctta
gaaggggatgtcaatatagctgtacttgaacgactagtaaccagatgccgcaacctcaag
actctcaaggtcaacaattctattcctcttgacatgcttgctagcctccttcgcaaggct
cctcagattgtagagctcggaacaggaagattctccgcggattaccatctgaatctcttt
tcaaaacttgaagcagcatttgctggttgtaaaagcctaagaaggctttctggggcctgg
gatgctgttccagagtacctgccagcattttattccgtatgtgagggcctcacatcacta
aatttgagttatgctactgtacgaggccctgagctgattaaattcattagcagatgcaaa
aatctgcaactcttatgggtgatggatttaattgaggaccacggtcttgctattgtggca
tcatcttgtaataaactgcaggagttgcgggtcttcccttcttctcctttcgatgcagtc
gagcaggtttcattgactgaaagaggtcttgttgatgtctctgccagctgcccaatgttg
gaatcggtcctctacttctgcagacggatgaccaatgaggcccttattaccattgcaaag
aaccggcccaacttcacttgcttccgcctatgcatcatagagccgcacacaccagattac
atcacgcatcagcctcttgatgcaggttttagtgccattgtggaatcatgcaagggcctt
aggcggctttctgtctcaggccttctcacagaccgtgtatttaaatccatcggggcacat
gctgatcgtctcgagatgctttcaatcgcctttgctggcaacagtgacttgggccttcat
tacatcctttcgggctgcaagagcttgaagaagctggagatcagggactgcccatttggt
gataagcctttgctggcaaatgctgccaagctggagacaatgcgatccctttggatgtcg
tcgtgctcactgaccctgggcgcatgcagacagcttgcacgcaagatgccccgccttagt
gtggaggtcatgaatgatcctcgacgggcatgccccttggactcgcttacagatgagagc
cctgtcgagacactgtatgtctaccggacaattgcaggtccaaggtccgacacaccagcc
tgcgtccagattgtttag
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