Panicum hallii (Hall's panicgrass): 112885023
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Entry
112885023 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112885023
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112885023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112885023
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112885023
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112885023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese_C
Motif
Other DBs
NCBI-GeneID:
112885023
NCBI-ProteinID:
XP_025806474
LinkDB
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Position
3:complement(2075927..2084097)
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AA seq
663 aa
AA seq
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MEKEFVAAQERLRPQEDKAEEDRSKEASVLPPRNREMGVFELKINQLVLDCAYCQQPLRP
DQIRPQAYTCAGGHIYCGACTRRHEKACISKCHLLDRTIAQMEFKCILCDSGGEYVPYGK
FFEHRCNTDVVDPKLPERQMEFAFYGRGRIKTSLLVCSECELPLRPPIFRHISGDVLICS
PCYRGDIVNYVRCSELDHLVQGIMVKCVACQEYIPFSALAWHQLRECPSKHKLQKIAPGS
SARKNLCDFILISDEEETERLSTCSSCIQGKNKQKAPYEVGKMDKHIVRGDEVGNDDDSL
DDNHEMGVFELKINQLVLDCAYCQQPLRPDQIRAQAYTCAGSHIYCGACTRRHEKACISR
CHLLDRTIAQMEFKCILCDSGGEYVPYGKFFEHRCNTDVVDPKLPERQMEFAFYGRGRIK
TSLLVCSECELPLRPPIFRHISGDVLICSPCYRGDIVNYVRCSELDHLVQGIMVKCVACQ
EYIPFSALAWHQLRECPSKHKLQKIAPGSSARKNLCDEEETERLSTCSSCIQGKNKQKAP
YEVGKMDKHIVRGDEVGNDDDSLDDNHAESGMRVAENAQKTAPTAAHASTSTCRCLPITA
PLKPPLPHRPVTRLFQAAHNRNRGGKMGALVTDSSTYKAGQQRTKREGPNIQRGIKRRSC
EQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagttcgttgccgcgcaggagcgactccgcccccaggaggacaaggccgag
gaggaccgatccaaggaagcctcggtcctgcccccaaggaaccgggagatgggtgtgttt
gaactcaagatcaaccagctagtactggattgcgcatactgccaacaacccctccggcct
gaccagatcaggccccaagcgtacacgtgcgctggcggccacatctattgtggtgcctgc
acccgccgacacgaaaaggcatgtatctccaagtgccatttgctggaccgcaccatcgct
cagatggagttcaaatgcatcctctgcgactccgggggcgaatacgtcccctacggcaag
ttttttgaacacaggtgcaacaccgacgtcgtcgatcccaagcttccggaacggcaaatg
gagttcgcgttttacgggcgcggccgcatcaagacaagtctacttgtctgctctgaatgc
gagcttcctctccgacctcctattttcaggcatatctctggtgacgttctcatttgtagc
ccctgctaccgtggggatatcgtcaactatgttcgctgcagtgagctcgaccacctcgtc
caaggtatcatggtgaaatgcgtggcttgccaagaatacattccattctccgccttggct
tggcaccagctgcgggagtgcccatccaagcataaattgcaaaagattgcgccaggctca
agtgctcggaaaaacttgtgtgactttatcctcatttcagatgaagaggaaactgagaga
ctttcaacgtgcagcagttgtatccagggaaaaaacaagcaaaaggctccttatgaggtt
ggtaaaatggacaagcacattgttcgtggtgacgaggttgggaatgatgatgactcattg
gatgacaaccatgagatgggtgtgtttgaactcaagatcaaccagctagtactggattgc
gcatactgccaacaacccctccggcctgaccagatcagggcccaagcgtacacgtgcgct
ggcagccacatctattgtggtgcctgcacccgccgacacgaaaaggcatgtatctccagg
tgccatttgctggaccgcaccatcgctcagatggagttcaaatgcatcctctgcgactcc
gggggcgaatacgtcccctacggcaagttttttgaacacaggtgcaacaccgacgtcgtc
gatcccaagcttccggaacggcaaatggagttcgcgttttacgggcgcggccgcatcaag
acaagtctacttgtctgctctgaatgcgagcttcctctccgacctcctattttcaggcat
atctctggtgacgttctcatttgtagcccctgctaccgtggggatatcgtcaactatgtt
cgctgcagtgagctcgaccacctcgtccaaggtatcatggtgaaatgcgtggcttgccaa
gaatacattccattctccgccttggcttggcaccagctgcgggagtgcccatccaagcat
aaattgcaaaagattgcgccaggctcaagtgctcggaaaaacttgtgtgatgaagaggaa
actgagagactttcaacgtgcagcagttgtatccagggaaaaaacaagcaaaaggctcct
tatgaggttggtaaaatggacaagcacattgttcgtggtgacgaggttgggaatgatgat
gactcattggatgacaaccatgctgagagtggcatgagagtggctgaaaacgcgcagaaa
acagcacctactgcagcccatgctagcacgtcgacatgtcgatgcctgcccatcacggct
cccttgaagccacctctacctcatcgtccagtcacccgtctcttccaagcagcccacaac
aggaataggggtggtaaaatgggtgcccttgtgactgatagctcaacctacaaagcaggc
cagcaacggaccaaacgtgaaggtcctaatatccaacgggggataaaacggcgctcttgt
gaacaatcgtaa
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