Panicum hallii (Hall's panicgrass): 112885108
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Entry
112885108 CDS
T07366
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112885108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112885108
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112885108
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112885108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
112885108
NCBI-ProteinID:
XP_025806568
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All DBs
Position
3:7818384..7819223
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AA seq
279 aa
AA seq
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MDFLPQNYYCNFSSKQKQIVQYPGKLKATGKCHHVCGVATGSYRLCHAMERLVESIRVPC
PHAAHGCTARPAYHDREGHRSACPHAPCHCPGEACSFLGSTSALLDHISEVHSWPCITNL
EAEKYGEFAVHLHDGFDFLLADCPTANMKQGATATVQCLLLLTMARQPVGRTISVLCIDP
HAAAAANGGDGPAASKQMECRLTYYRPWDFNDNNHHGGHQVWDHYQQSNFRVACTDLSDG
MPNPDGCFQFVLTNSVIGAYDRDGIEVRVGIYKYTGRCV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggacttcttgcctcaaaattactactgtaattttagttctaaacagaaacaaatagtt
caatacccgggcaagctcaaggccacgggcaagtgccaccatgtgtgtggtgtcgccacc
ggcagctaccgcctgtgccatgccatggagcgactggtggagtccatccgcgtcccatgc
ccgcacgccgcccatggctgcaccgcgaggccggcctaccatgatcgagaaggccaccgc
tcggcgtgcccgcacgcgccatgccactgccctggtgaggcatgcagctttcttggctcg
actagcgcgctcctggaccacatcagcgaggtgcacagctggccgtgcatcaccaacctc
gaggccgaaaagtacggcgaatttgctgtccacctccatgacggcttcgacttcctcctt
gctgattgccccacagccaacatgaagcaaggcgccaccgctaccgttcagtgcctgctc
ctgctgactatggcacggcaaccggttggccgcaccatctctgtgctctgcattgaccct
catgccgccgccgccgccaatggtggtgatggaccagcggcctcaaagcaaatggaatgc
aggcttacatattatcggccctgggacttcaacgacaacaatcatcatggaggtcatcag
gtatgggaccattaccagcaatccaacttcagagtagcatgcacggacctctccgatggg
atgcctaaccccgatggctgcttccagtttgtcctgacaaactcagttattggagcctat
gacagggatggtatcgaggtcagagttggtatttataagtacaccggccggtgtgtgtag
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