Panicum hallii (Hall's panicgrass): 112885110
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Entry
112885110 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112885110
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112885110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112885110
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112885110
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112885110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
112885110
NCBI-ProteinID:
XP_025806569
LinkDB
All DBs
Position
3:7832292..7832912
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AA seq
206 aa
AA seq
DB search
MEQMVDSVRVACPHAAHGCADRSAYHDRGRHARECAHAPCRCPGRDCGFVGPAPALAEHA
AAAHGWPCTAEAIAGCSFGVDLRDGFNLLTAVRGGAQHLLLLNGSTPFGRAISAVQVLPQ
VASTGSSSAAAPAASGAKCELELHYWRYKGILREHCLVSRFEVPSMDPSDALPDPSTSFQ
FFVPKSVRGHDEAAVHVNVVISINSS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatggtggactccgtccgcgtcgcgtgcccgcacgccgcgcacggctgcgcc
gacaggtccgcgtaccacgaccggggacgccacgcccgtgagtgcgcgcacgcgccctgc
cgttgccccggccgcgactgcggcttcgtcggccccgcgccggcgctcgccgagcacgcc
gccgccgcgcacggttggccgtgcaccgccgaggccatcgccggctgctccttcggcgtc
gacctccgcgacggcttcaacctcctcaccgccgtccgcggcggcgctcagcacctgctc
ctgctgaacgggagcacgccgttcggccgcgccatctccgcggtacaggtcctccctcag
gtggcctccacgggcagctcgtcggcggcggcgccggcggcgagtggcgcgaaatgcgag
ctcgagctccactactggcgctacaagggcatcctacgcgagcactgcctggtatcccgg
ttcgaggtcccatccatggatccctcggacgcgctgccggatcccagcacctccttccag
ttcttcgtccctaagagtgttcgtggacacgacgaggctgctgttcacgtcaatgttgtt
atctcgatcaattcatcgtaa
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