Panicum hallii (Hall's panicgrass): 112885124
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Entry
112885124 CDS
T07366
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112885124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112885124
Spliceosome [BR:
phai03041
]
Common components
Common spliceosomal components
SR proteins
112885124
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
112885124
NCBI-ProteinID:
XP_025806580
LinkDB
All DBs
Position
3:complement(8456538..8459808)
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AA seq
230 aa
AA seq
DB search
MAFKAKYKQLLRFSAGSTADGGGGGGGYGGGGATPQNSPRQGPLPSPRGPPSPPDVECKM
PRYNGYCNHDDHSSHIGGRTTLYVGSISPDAREQDLEAAFSIYGRVQRVLLHPENYGFVV
FYEPQDADAARRRLNCQEFFGSRISVEFAKEHRIPRYDNHHGHDDRYDQYGQQGGNTKLF
VGNISRDIQEYHIEGLFSIYGRSFIIPRMQMMQGVSLMVKNLVGAVFLLV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaaggccaaatacaagcagctgctgcgcttcagcgcgggaagcaccgcagat
ggcggaggcggcggcggcggctacggaggaggcggagctacgccgcagaactcgccgcga
caaggaccgctcccttcgccgcgaggtccaccttcgccgccggatgtcgagtgcaaaatg
cctcgatacaacggctactgcaatcatgatgatcatagtagtcacattggtggtcgaacc
acgttatatgtggggagcatttctccggatgctcgagagcaagatcttgaggctgctttc
agcatatatgggagagtgcagcgggtgcttctgcaccccgagaactatggctttgttgtg
ttttatgaaccacaggatgcagatgctgcaaggcgtcgtcttaattgccaagaatttttt
gggagtcgcatcagtgttgagtttgcaaaagagcacagaatcccccgatacgacaaccac
catggtcatgatgatcgatatgatcaatatggtcaacaaggtggtaacaccaagttgttc
gtgggcaacatttcccgagatatccaggaatatcatattgaaggcctattcagcatatat
gggaggagttttattatccccaggatgcagatgatgcaaggcgtgagcttgatggtgaag
aatttggttggagccgtatttttgttagtttga
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