Panicum hallii (Hall's panicgrass): 112885334
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Entry
112885334 CDS
T07366
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112885334
Membrane trafficking [BR:
phai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
112885334
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
112885334
NCBI-ProteinID:
XP_025806760
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Position
1:57563192..57572488
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AA seq
1124 aa
AA seq
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MYLAYGWPQSIPLDPDDSDRVVLLRVLGRLLLAVCPASLHLWSAAQHRVRLARFDRSPDS
LAAHGQNAHAVWSPDAKTVAVLTSSFYLHIYRVQLSGKPLIVGGKQLPGLCLASISLIIT
EKVPLANGVAITSNFVCDSKSMLLGLSNGHVQVVSWNAEFSDSFKLGCSVCSSEKPTAVV
DALVFDPPSLRENSNARPAPCCTGNSSIVHVELSVKLRLLVALYSGCHIALCTVGKKGLK
QPGSIRVESWLNTDDAMCTSVASEQQILSVGCSRGVVELYDLAENMRHIRTISLYDWGYS
VEDTGPVACISWTPDNCAFAVGWKFRGLTVWSVSGCRLMCTIRQTGSNSASSPMVKPSAL
KFEPLMGGTSHIQWDDNGYKLFAVEESLSERVLAFSFAKCCLNRGLSGATYSHQVLYGDD
RILLVQPDDADELKLLHLNVPVSYISQNWPVLHVVASNDGMYLAVAGSHGLVLYDLRNKR
WRFFGDVTQEQKIQCKGLLWLGKIVIVCNYVESSNTYELLFFPRYHLDYSSLLYRKPLLG
RPIVMDVFQDYILVTYSPFDVHIFHVVILGELSPASNPVLQLSTVRELSIMSPKSPPVSM
RFIPEQHDKGVLKQDTNGSSGFSSEQPSRCLILRTNGELSVLDMDDGHEHALTNSVELFW
VTCSQFEEKGSLIKEVSWLDYGHRGMQVWYPSHGADPFKQEDFLQLDPELEFDREVYPLG
LLPNVGVVVGVSQRMSFSTAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRLANLSAE
KPHFSHCLEWLLFTVFDADISRPSASKKQVPQKVDYPKKSLLEKTCDLLRNFPEYMDVVV
SVARKTDGRHWADLFSAAGRSTEMFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALRL
LQATLDESLYELAGELVRFLLRSGRDFENATADSEKLSPRFLGYFLFRSPYKRQSSDLKS
NSMKELSPHIASVMNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERLGSARLEN
FASALELIGQKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHDL
RLWKAYSVTLQSHDVFREYLDLLNMLEEQLSSVSDVTLQNGPLS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacctggcgtacgggtggccgcagtcgatcccgctggacccggacgactcggaccgc
gtggtcctcctccgcgtcctcgggcgcctcctcctcgccgtctgccccgcctcgctccac
ctctggtccgccgcgcagcaccgggtccgcctcgcccgcttcgaccgctccccggactcc
ctcgccgcccacggccagaacgcgcacgccgtgtggagtcccgacgccaagaccgtcgcc
gtcctgacctcctccttctacctccacatatacagggttcagctttcagggaagccactg
atcgtcggtggcaagcagctcccggggctttgcctggccagtatatccctaatcatcacc
gagaaggttcctctcgccaatggtgttgctataacgagcaatttcgtatgtgacagcaag
agcatgctcctcggactatccaatgggcatgtgcaggtcgtgtcctggaatgctgagttc
tcagacagcttcaagcttggttgctctgtgtgttcgtctgagaaacctactgctgtcgta
gatgcgttggtgtttgatcctcccagtttacgagaaaactctaatgcaaggcctgctcct
tgctgcacaggcaattcttctatcgtccatgttgagttgtcagtgaagctaaggttgctg
gttgccttgtactcaggctgtcacattgccctctgtactgttggtaagaagggattaaag
cagcctgggagcatcagagtggagagctggttgaacactgatgatgcgatgtgtacttct
gtggcttctgagcaacagattctttctgtcggatgcagtagaggtgttgttgaattatat
gatctagctgagaatatgcgtcatatacgaacgatttcgttgtatgattgggggtattca
gtggaagatactggtcctgttgcctgtatatcttggacacctgacaattgtgcttttgca
gttggatggaaatttaggggacttactgtatggtctgtgtctggatgtcgattgatgtgt
actattcgtcaaactggatcaaattccgcctcttctccaatggtgaaacctagcgctcta
aaatttgagcctctaatgggagggacatcacacattcaatgggatgataatggatataag
ttatttgctgttgaagaaagcttgtcagaaagggttcttgctttctcatttgccaaatgt
tgcctaaacagaggactttcaggcgcaacgtattcccaccaggttctttatggagatgat
cgaatccttttggtgcaaccggatgatgctgatgaactgaagctattgcatcttaatgtt
ccagtttcctacatttcccagaactggccagttctacatgtagtagcaagcaatgatggt
atgtacttggcagttgctggttctcatgggctagtgctgtatgatctgcgaaataaaagg
tggcgtttttttggtgatgttacacaagagcaaaagatccaatgcaaaggcctattgtgg
cttggaaaaattgttattgtatgcaactatgttgaatcatcaaacacgtacgagcttctc
ttttttccaagatatcatcttgattatagctccttactctaccggaaaccactgcttgga
aggccaattgtcatggatgttttccaggattacatattagttacctacagtccatttgat
gtgcatatattccatgtggtgatattgggagaattgtcacctgctagcaatccggtttta
cagctttcaacagtgcgagaactttcaatcatgagtccaaagagcccacctgtttcaatg
cgcttcattcccgaacaacatgacaaaggggtgctgaaacaggatactaatggatcttct
ggtttttcatccgagcaaccatcaagatgtttgatcttgcggaccaatggtgaactttct
gtgctggacatggatgatggacacgaacacgcactcacaaattcagttgaactcttttgg
gtcacttgttcgcaatttgaagagaagggtagtcttattaaagaggtttcatggcttgac
tatggtcatcggggcatgcaggtatggtacccatcgcatggagcagatccttttaagcaa
gaagatttcttgcagctggatcctgagcttgagtttgatcgtgaggtgtatcctcttggt
cttcttccaaatgttggtgtggtcgttggtgtttctcaaagaatgtccttctcaactgct
gagtttccatgctttgagccttcacctcaagcccaaacaatattgcattgcttattacga
catctacttcagagggacaagattgaagaagctttgcgcttggcgaatttgtcagcagaa
aaacctcacttttcacactgtttagagtggcttctgtttaccgtatttgatgcagatata
tcaaggccaagtgcttcaaaaaaacaggttccacaaaaagttgattatccaaagaaatct
cttctcgagaagacatgtgacctactgcggaattttcctgaatatatggatgttgtagtc
agtgttgctaggaaaacagatggtcgacactgggctgatcttttctctgcagctggacga
tccacagagatgtttgaggaatgcttccaacggagatggtacaggactgctgcttgctac
atactggtcattgctaagctggagggccctgcagtcagtcagtactgtgcactccgtttg
cttcaagctacacttgatgaatctttgtatgagcttgctggggagttggttcgcttcttg
ctaagatctggaagagattttgagaatgcaaccgcagactctgagaagctctctccaaga
tttcttggctattttctattccgttcaccatataagcggcaatcttctgatttgaaaagc
aactcaatgaaagaacttagtccacatattgcctctgttatgaacattctagagagccat
gctagctatttgatgtctggcaaggagctttctaaacttgttgcttttgtcaaagggaca
caatttgatcttgtggagtatcttcaacgagaaagactagggtctgctcggctggagaat
tttgcatctgcacttgaactgattggacaaaagctccaaatggacacactccaaagccgg
cttgatgctgagttccttctagctcatatgtgttcagtcaaatttaaggaatggatcgtg
gtgctagctactttattgcgacgtgcagaggttttggtggatctctttcggcacgatttg
cgattgtggaaagcatatagcgttactctacagtcacatgatgtattcagagaatatctc
gatcttcttaatatgttggaggagcagctttcgtctgtctctgatgttacattgcaaaat
ggaccattgtcttga
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