Panicum hallii (Hall's panicgrass): 112885379
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Entry
112885379 CDS
T07366
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112885379
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phai04812
]
112885379
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112885379
Cytoskeleton proteins [BR:
phai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112885379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_EZ
PDS5
Maestro_HEAT
Cnd1
Adaptin_N
Tti2
TTI1
Sec7-like_HUS
Rif1_N
Sec7-like_HDS
UTP20_C
MMS19_C
V-ATPase_H_N
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
112885379
NCBI-ProteinID:
XP_025806797
LinkDB
All DBs
Position
1:complement(49764289..49776888)
Genome browser
AA seq
1415 aa
AA seq
DB search
MEAALEAARAKDTKERLAGVERLHEALDAAARRGLSAAEVTSLVDTCMDLSGDGNFRIAQ
GGLQALSAAAVLAGDHFKIHLNALVPAAVERLGDGKQPVREAARQLIVTLMEVSSPTIVV
ERAGSYAWTHKSWRVREEFVRTVSAAVGLFASTELPLQRVLLSPVLQLMNDLNRSVRDAA
ISCIEEMYKNIGSQFHEELQRHNLPAYMLKEINSRLDKIEPNAPSSNGARIQCRAKESRS
ISANPKRGSPRKKGTPRESTLFGGDMDINEKPVEPIRVHSEKELVRDFEKVASVLNPEKD
WSIRIAAMKRIEALVYGGAINYPSFPMLLKLLVSPLSSQLSDRRSSIVKQACHLLNVLSK
ELLGNFEPCAEIFIPVLFKLVVITVLVIAESADNCIKSILRNCKVSLLPLVADTAKNDRS
AVLRARCCEYALLILEYWVDAPEIQRSADLYEDLIKSCVADAMSEVRATARTCYRMFTKK
WPERSRRLFMSFDPAIQRIINDEDGGMHKRYPSPSMHERGVQLSRSSSDAGGTHFGYDTS
AIVAMDKGAVISLESPLSSSSLLLSQSKTIGRSAERSIESVLSSSKQKVSAIESLLKGVS
ISDRQDFSAIRSTTLDHGVDRPSSRDPPSPSAPPASYSSLNGITSSRNDGSSKERSSSSY
LRNLSSEPIEGLSLPSLRSSGRSQDGSIMDENHDTWPNRPSPKMQMDKHYVDMPYRDVGY
RNSFNSHVLHFQRPLRKQVVSRASASGRRSFDVGHAPSNDLSGYTDGSASLSDALSEGLS
PNSDWAARVAAFNFIQILLQQGQKGIQDITQNFEKVMKLFLRYLEDPHHKVAQAAFSTLA
DIIPAFKKHFESYIGRILPYIFSRLIDPKELVRQPCSSTLDIVGRTYSIDTLLPALVRSL
DEQRSPKAKLAVLEFANKSFDNYTVGSEGYSNSGFLKLWLTKLAPLIHEKNAKLKEASIS
GIISVYSHFDSAAVLNLILSLSIDEQNIVRRALKQYTPRIEVDLVNYLQNKKERSRPKSY
DRVDSSTSSEDGYALTLKKSLPFGRFSDSLLDTESGRKMNTVQESALHNVPISRATSDVC
FDHAKQCFERASEAEVLVQSRELKNNTRTVVEAVHSWEDYPEKSDATMDDENSTGTTRLD
LSHLPSDGRNSVLAISEEHTQEGDPFVDLSPVKIFPHANNGPSVPQLLHQIGSGGEISTL
DKREVLHQLVRASTDKDNFIWTKYFNQILTTVLEVLDDTDSSVREDSLLLVAEMLHNQKD
SMEESIEVVLEKLLHVTKDVDAKVSNEAHQCLYVLVAKYDPFRCLAIIAPFLASDDEKTL
VMCINCLTKLVGRLSQDELVTQLPSFLPAVFDAFNNLSPDVRKAVVFCLVDIYIILGKAF
VPYLEGLSSTQLRLVTIYASRISQARSGAPVDANQ
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcgctggaggcggcgcgcgccaaggacacgaaggagcggttggcgggcgtg
gagcgtctgcacgaggcgctggacgccgcggcgcggcgcgggctgagtgccgcggaggtg
acgtcgttggtggacacctgcatggatctctccggggacggcaacttccgcatcgcccag
ggcgggctgcaggcgctctccgccgcggcggtgctcgccggcgaccactttaagatccac
ctcaacgcgctcgtgcccgccgccgtcgagcgcctcggcgacggcaagcagcccgtccgc
gaagccgcccggcagctgatcgtcaccctcatggaggtttcttcgccaacaatcgttgtt
gaaagagctggaagttatgcatggactcacaagagctggagagtgcgggaagagtttgtc
cgaacagtttcagcggcagttgggctttttgcttctacagagctcccactgcagcgagtg
ttgctttcacctgttctgcaattgatgaatgatctgaaccgaagtgttagagacgctgca
atctcatgtattgaggagatgtacaaaaacataggatctcagttccacgaagagttgcag
cgccacaatctacctgcttatatgctaaaggaaataaattcaagattggataaaatagag
ccaaatgcgccctcatccaatggagctagaatccagtgtagggccaaggaatctagatct
attagtgctaatccaaaaagaggcagcccaaggaaaaaaggcacgccaagggaaagcaca
ctatttggaggtgacatggatattaatgagaagccagtggaacctataagagttcactca
gagaaagaattagttagagattttgaaaaggttgcatctgtccttaatccagagaaggac
tggtctatacgtattgctgctatgaaaaggatcgaagccttggtatatggaggtgctatc
aattacccatcatttcctatgctcttaaagctgctggtttctccattgtcctctcagctg
tccgaccgacgatccagcatagttaaacaggcatgccatctacttaatgtactatcaaag
gaacttcttggtaactttgaaccatgtgctgaaatatttattccggtactgtttaagctt
gttgtcataactgtgctcgtgattgccgaatctgcagacaactgcataaaatctattctg
cgtaactgcaaggtttcacttcttccacttgtagctgatacggcaaagaatgaccgcagt
gcagtcctccgtgctagatgctgtgaatatgcactcttaatattggagtattgggtggat
gctccagaaatacagcgctcagctgatttatatgaagacctaataaagtcctgtgttgca
gatgcaatgagtgaggtccgtgcaacagcaaggacttgttacaggatgttcactaaaaaa
tggccggagcggtcacgacggctttttatgtcatttgatcctgccatacagaggataata
aatgatgaagatgggggaatgcacaagcggtatccttctccatcaatgcatgagagaggg
gttcaactttctcggtcttcatccgatgctggtggtacccattttggatatgatacttca
gctattgttgcaatggacaagggtgcagttatttctttggaatcacctctctcgtctagc
agtcttttattgtcacagtcaaagacaattggtagaagtgctgaaagaagtatagagagt
gtgctaagttccagcaaacaaaaggtttcagccattgaaagtttattgaaaggtgtaagc
atatcagataggcaagatttctcagctattcgctcaacaaccttggaccatggagttgat
cgtccatcctcccgtgatcctccttccccatctgctccacctgcttcatattcatccctt
aatggcataactagctcaagaaatgatggttcatccaaagagcgatcgagctcatcttat
ttgcgtaatctatcatctgaaccaatagaaggcttgtcattgccgtctctaagatcttca
gggaggtctcaagatggtagcattatggatgagaatcatgatacatggccaaataggcca
tcaccaaaaatgcagatggacaaacactacgtggatatgccctatagggatgtcggttat
agaaattcatttaacagtcatgttctgcacttccagaggcctcttaggaagcaagtagta
tcaagagcttctgcaagtggtaggcgcagttttgacgttggtcatgccccatctaatgac
ttgagtggatatacagatggttcagcatctctaagtgatgcactctctgagggccttagt
ccaaattcagactgggcagctagagttgcagcgttcaacttcattcagatattgctgcaa
caaggacagaaaggcattcaagatattactcagaactttgaaaaggttatgaagctattt
ttacgttacttggaggatcctcatcacaaagttgcacaggcagctttctccacacttgca
gatattattccagcattcaaaaagcattttgagagctatattggaagaatcttaccatac
atcttttcaagacttatcgatccaaaggaattagttcgacaaccatgttcctcaaccttg
gacattgttggccgaacatattctatcgatacgttgctacctgcactagttcgttcactg
gatgaacaaaggtctccaaaggcaaaactggctgttcttgagtttgcaaacaaatcattc
gacaattacacagtaggttcggaaggttacagtaacagtggctttcttaagctctggctt
acgaaactagcccctctaatacacgaaaagaatgctaagttaaaggaagcatctatttct
ggaataatatcagtttattctcattttgattcagccgcagtcctaaatttaattcttagt
ttgtcgattgatgaacagaatattgtgaggcgagctttgaagcaatatacacctcgtatt
gaggtcgatttggtcaactaccttcaaaacaagaaagaacgttcacgtcctaaatcttac
gaccgagttgattctagcacttcttctgaagatggttatgctctgacattgaagaaaagc
cttccatttggacgcttttctgacagtttactagacactgaatcagggagaaagatgaat
acagtgcaagaatcagcattacataacgtacccattagtcgagctacctctgatgtctgc
tttgatcatgctaagcaatgttttgaacgtgcctctgaagctgaagttctcgtgcaaagt
agggaactaaagaacaatacccgcacagttgtagaagctgtgcattcatgggaagattat
cctgaaaaatcagatgccaccatggatgatgaaaattctaccggtactactcgcttggat
ttgagccatcttccatcagatggacgtaattctgttctagcaatttctgaggagcacact
caagagggagatccatttgttgatcttagtcctgtaaaaattttcccacatgccaataat
ggtcctagcgtgccacaacttcttcatcagattggcagcggtggtgaaatttcaacccta
gacaagcgggaggtgttacatcagttggttagagcttctaccgataaagataactttata
tggacaaagtatttcaaccagatcttaacaactgtccttgaagtgttggatgacactgat
tcctctgtaagggaggattctctgttgttagttgctgagatgctccacaatcagaaagat
tctatggaagaatccattgaggttgttcttgaaaagctcctacacgtgaccaaagatgtt
gatgcgaaggtttcaaatgaagcacatcaatgcttatatgtcctggtggcaaaatatgac
ccttttagatgccttgctattattgcgccttttctggctagtgatgatgaaaagacactt
gtcatgtgtatcaactgtttgacaaagcttgttgggcgactctcacaggacgaattggtt
actcaactgccttcatttttacctgcagtgtttgatgctttcaataatctgagtccagat
gttcgcaaggctgttgttttctgtttagtggatatctacatcatccttggaaaagcattt
gtaccatatctggagggccttagtagcacacagctgcgcctagtaacaatctatgcaagt
aggatatcacaggcaaggtctggtgcaccagtggatgctaaccaatga
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