Panicum hallii (Hall's panicgrass): 112885519
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Entry
112885519 CDS
T07366
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Module
phai_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112885519
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112885519
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112885519
NCBI-ProteinID:
XP_025806906
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Position
3:complement(56050917..56052284)
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AA seq
455 aa
AA seq
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MAMASRTLLATACLLVLLLLTLGGALVEARRPWPRWPHREVAPSYGLSTTADAPESSSVD
GYATTFDVGSFGAAGDGKTDDTAAFQNAWAQACSSAQPAVVLVPAGRSYLLKETSLSGPC
KSRVTFRLDGTLVAPEDKSGWGKQGSLPRWIIFRGVDGLTVIGEGAMDGRGEASWKNSCR
TNHAMPCTIAPSALTFASCDRLVVEGISLLNAPQIHLWVELCRDVTLSRLTIASPGDSPE
NDGIHVARSDGVRILGARIEAGDDCLSVVTGTTNLYATRIECGPGHGISIGSLGRGNTRA
EVSNVTVDGAHVSGTMFGARIKTWQGGSGFVRGVKFLNMAMDRVKNPILIDQNYCTTPHP
SNTTACDHKQSQSSAVQVSDVVFSNIRGTTVARDAIRLHCSQAFPCRDIVLMDIDLKTRG
NGEKNAATSTCDNALLGVSSSVSPTPCSSVATNKD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcctcgcgcacgctcctcgccacggcttgccttctcgtcctgctgctcctg
acgctgggcggcgctctcgtcgaggcacggcgtccatggccacggtggccgcaccgcgag
gttgctccaagttacgggctctcgacgacggcggacgcgccggagagtagtagtgtcgat
ggttacgcgacgacgtttgacgtcggcagcttcggagccgccggcgacgggaagacggac
gacacggccgcgttccagaacgcatgggcccaggcctgctcctcggcacagccagccgtc
gtgctcgtgcctgccggaaggagctacctcctcaaggaaaccagcctgtccggtccgtgc
aagtccagggtcacgttcaggctggacggaacgctggtggctccggaggacaagtcgggc
tggggcaagcaaggcagcctccctcgctggatcatcttcaggggcgtcgacggcctcacg
gtgatcggcgagggcgccatggacggccggggcgaggcgtcgtggaagaactcgtgccgg
acgaaccacgcgatgccgtgcaccatcgcgccgtcggcgctcaccttcgcgtcgtgcgac
cgcctcgtggtggagggcatcagcctgctgaacgcgccgcagatccacctgtgggtggag
ctctgccgcgacgtgacgctgtcccggctcaccatcgcgtcgcccggcgacagccccgag
aacgacggcatccacgtcgcgcgcagcgacggcgtgcgcatcctcggggccaggatcgag
gccggcgacgactgcctgtcggtggtgacgggcacgacgaacctgtacgccaccaggata
gagtgcggccccgggcacgggatcagcatcgggagcctgggcagagggaacaccagggcc
gaggtgtccaacgtcactgtcgacggggcgcacgtgtcgggcacgatgttcggggcgagg
atcaagacgtggcaggggggcagcgggttcgtaaggggcgtcaagttcctgaatatggcg
atggacagggtgaagaaccccatcttgatcgaccagaactactgcaccacgccgcacccc
tccaataccacggcgtgcgatcacaaacagagccagagctccgccgtccaggtcagcgac
gtcgtgttcagcaacatcaggggcaccaccgtcgccagggacgccatcaggctgcactgc
agccaggccttcccgtgccgcgacattgtgctcatggacatcgacctcaagacgaggggg
aacggcgagaagaacgccgccacgagcacctgcgacaacgccctgctgggagtgtccagc
agcgtttctccgacgccgtgctcgtccgtggcgaccaacaaggattag
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