Panicum hallii (Hall's panicgrass): 112885666
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Entry
112885666 CDS
T07366
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03030
DNA replication
phai03410
Base excision repair
phai03420
Nucleotide excision repair
phai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112885666
03410 Base excision repair
112885666
03420 Nucleotide excision repair
112885666
03430 Mismatch repair
112885666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phai03032
]
112885666
03036 Chromosome and associated proteins [BR:
phai03036
]
112885666
03400 DNA repair and recombination proteins [BR:
phai03400
]
112885666
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112885666
DNA Replication Termination Factors
ELG1-RFC complex
112885666
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112885666
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112885666
Check point factors
HRAD17(Rad24)-RFC complex
112885666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_14
AAA_5
AAA_assoc_2
AAA_16
ResIII
SLFN-g3_helicase
AAA_24
PhoH
nSTAND3
AAA_19
AAA_2
AAA_30
AAA_28
AAA_7
DNAX_ATPase_lid
AAA_25
AAA_18
RNA_helicase
Cdc6_lid
AAA_17
NB-ARC
Gp44_lid
bpMoxR
Parvo_NS1
TIP49
NPHP3_N
ATPase_2
DUF815
Motif
Other DBs
NCBI-GeneID:
112885666
NCBI-ProteinID:
XP_025807019
LinkDB
All DBs
Position
3:3019545..3023650
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTTRKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSS
RIMHICNEEGLNLDSQALSTLSAISQGDLRRAITYLQSAARLFGSSISPTDLISVSGVIP
EDVVKSLLAACRSGEFDVANKEVSNIIAEGYPVSQLMAQFLDVIVSTDDIPDEQKARICK
KLGETDKCLVDGADEYLQLLDVASETIRALFNMPQTLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcccctctagtgccgatgtcgcagccatgggtggagaaataccggccgaggcaggtg
aaggacgtcgcgcaccaggaggaggtgattcgggtgctcaccaacaccctccagaccgcc
gatctgccgcacatgctgttctacggcccgccaggcacggggaagaccaccactgcactc
gccatcgcccaccagctctacggtccagagctgtacaagtcaagagttttggagctcaat
gctagtgatgatcgcggaattaatgtggtgaggacgaaaatcaaggactttgctgctgtt
gctgttggtactacacggaaagctggttatccctgcccaccttacaagattattatactt
gatgaagccgattcaatgacagaagatgcccagaatgctttgaggcgtactatggagact
tactccaaagtgaccagattcttttttatatgcaactatatcagcaggataatagaacca
cttgcatcgagatgtgcaaagtttaggttcaagcctctttcagaagaagtgatgagcagc
cgcattatgcatatatgcaatgaagaaggtctcaatcttgattctcaggctctatccaca
ctgagtgccatttctcaaggtgatctccgtcgtgctataacctatcttcagagtgcagcc
cgcttatttggatcttctatttcccccactgacttgatcagtgtttctggggtcatcccg
gaagatgttgtcaagtcactgcttgcagcctgcagatctggtgaatttgatgtggcaaac
aaagaagttagcaatattatcgccgagggatatccagtttcacagctgatggctcagttt
ctagatgtgattgttagcacagacgatattccagatgagcaaaaggcaaggatatgtaaa
aagcttggggaaactgataagtgcttggtcgatggtgcagatgagtatcttcaacttttg
gatgttgccagcgagactattcgtgctcttttcaacatgccacaaacgttggtcttttga
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