Panicum hallii (Hall's panicgrass): 112885678
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Entry
112885678 CDS
T07366
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-A-like
KO
K08770
ubiquitin C
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112885678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112885678
Ubiquitin system [BR:
phai04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
112885678
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
Motif
Other DBs
NCBI-GeneID:
112885678
NCBI-ProteinID:
XP_025807074
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All DBs
Position
1:complement(3063821..3071853)
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AA seq
839 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGQXMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP
DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE
SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagaccctcactggcaagaccatcaccctcgaggtggagtcctcc
gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag
cagaggctcatcttcgccggcaagcagctggaggatggccgcactcttgcggactacaac
atccagaaggagagcactcttcacctggtgctccgcttgaggggtgggatgcagatcttc
gttaagaccctcacaggcaagaccatcacccttgaggtggagtcttccgacaccatcgac
aacgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagaggctcatc
tttgccggcaagcagctggaggatggccgcacccttgcggactacaacatccagaaggag
agcactctccacctggtgctccgcctgaggggtgggatgcagattttcgttaagaccctc
acaggcaagaccatcacccttgaggtggagtcctccgacaccatcgacaacgtcaaggcc
aagatccaggacaaggagggcatccccccggaccagcagcgtctgatctttgctggcaag
cagttggaggatgggcgcacccttgcggactacaacattcagaaggagagcactctccac
ctggtgctccgcctgaggggtgggatgcagatcttcgttaagaccctcacaggcaagacc
atcaccctcgaggtggagtcctccgacaccatcgataacgtcaaggccaagatccaggac
aaggagggcatccccccggaccagcagaggctcatctttgctggcaagcagcttgaggac
ggccgcacccttgccgactacaacatccagaaggagagcaccctccacctggtgcttcgc
ctgaggggtgggatgcagatctttgtgaagaccttgactggcaagaccatcaccctcgag
gtggagtcctccgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatc
cccccggaccagcagcgtctgatctttgctggcaagcagctggaggatggccgcaccctt
gctgactacaatatccagaaggagtcgaccctccatttggtgctccgcctccgtggtggc
cagtaaatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggtggag
tcttctgacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccccccg
gaccagcagaggctcatctttgccggcaagcagcttgaggacggccgcacccttgccgac
tacaacatccagaaggagagcaccctccacctggtgctccgcctgaggggtgggatgcag
atctttgtgaagaccctcaccggcaagaccatcaccctcgaggtggagtcctccgacacc
atcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagagg
ctcatctttgccggcaagcagctggaggatggccgcactcttgcagactacaacatccag
aaggagagcactctccacctggtgctccgcctgaggggtgggatgcagatctttgttaag
accctcaccggcaagaccatcaccctcgaggtggagtcctctgacaccatcgacaacgtc
aaggccaagatccaggacaaggagggcatccccccggaccagcagaggctcatctttgcc
ggcaagcagcttgaggacggacgcacccttgctgactacaacatccagaaggagagcacc
ctccacctggtgcttcgcctgaggggtgggatgcagatctttgtgaagaccttgactggc
aagaccatcaccctcgaggtggagtcctccgacaccatcgacaacgtcaaggccaagatc
caggacaaggagggcatccccccggaccagcagaggctcatctttgctggcaagcagctt
gaggacggccgcacccttgccgattacaacatccagaaggagagcaccctccacctggtg
cttcgcctgaggggtgggatgcagatctttgtgaagaccttgactggcaagaccatcacc
ctcgaggtggagtcctccgacaccatcgacaacgtcaaggccaagatccaggacaaggag
ggcatccccccggaccagcagaggctcatcttcgctggcaagcagctggaggacggccgc
acccttgccgactacaacatccagaaggagagcactctccatctggtgcttcgtctgagg
ggtgggatgcagatctttgtgaagaccttgactggcaagaccatcacccttgaggttgag
agctccgacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccccccg
gaccagcagcgtctgatctttgcaggcaagcagctggaggatggccgcacccttgctgac
tacaatatccagaaggagtccaccctccacctggtgcttcgtctccgtggtggccagtaa
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