Panicum hallii (Hall's panicgrass): 112885773
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Entry
112885773 CDS
T07366
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112885773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112885773
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
112885773
Prokaryotic type
Archaeal type
TFB
112885773
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
Ribosomal_S27e
Zn_ribbon_9
Motif
Other DBs
NCBI-GeneID:
112885773
NCBI-ProteinID:
XP_025807198
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All DBs
Position
3:12694440..12695591
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AA seq
310 aa
AA seq
DB search
MHSAADDLLFCPDCHRRTEVVLDHATGDTICTECALVLDAHYVDEGSEWRNFADDGGGED
RDPSRVGGRNDPFLNNAPLDTRIVFNGPQKTLAEGGHALPRMRINGGPDPEQTLVEAFRA
IADMADRLGLVATIRDRAKDVYKKMDEAKACPRGRRRDEFYAACLFVACRNEGKPRTYKE
LATATSAGAGAKKEVGRMTTHIKKVLGEGAGQVMDIGVVHAVDYMRRFCSRLGMGNQEMR
AAQEAARRLDDSLDVRRNPESIAAAISYMVVQRAGASKTVRDVSMATGVAEATIKEAHKD
LTPHVELLFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgccgcggacgacctgctcttctgccctgactgccaccgccggacggaggtg
gtgctcgaccacgccaccggcgacaccatctgcaccgagtgcgcgctcgtcctcgacgcg
cactacgtcgacgagggcagcgagtggcgcaacttcgccgacgacggcggcggcgaggac
cgcgaccccagccgcgtcggcgggcgcaacgaccccttcctcaacaacgccccgctcgac
acccgcatcgtcttcaacggcccgcagaagacgctggccgagggcggccacgcgctgccg
aggatgcggatcaacggcgggccggaccccgagcagacgctggtcgaggcgttccgcgcc
atcgccgacatggccgaccgcctcggcctcgtcgccaccatcagggaccgcgccaaagac
gtgtacaagaagatggacgaggccaaggcgtgcccccggggcaggaggcgggacgagttc
tacgccgcctgcctcttcgtcgcgtgccgcaacgagggcaagccgcggacgtacaaggag
ctcgccacggcgacgagcgccggcgccggcgcgaagaaggaggtcggcaggatgaccacg
cacatcaagaaggtgctcggggagggggccgggcaggtgatggacatcggcgtcgtgcac
gccgtcgactacatgcgccgcttctgctcccgcctcgggatgggcaaccaggagatgcgc
gccgcgcaggaggcggcgcggaggctggacgactctctcgacgtgcggcgcaaccccgag
tccatcgcggccgccatcagctacatggtcgtgcagcgcgccggcgccagcaagaccgtc
cgggacgtgtccatggccaccggcgtcgccgaggctaccatcaaggaggcgcacaaggac
cttaccccgcacgtcgagctgctcttcgcctag
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