Panicum hallii (Hall's panicgrass): 112885809
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Entry
112885809 CDS
T07366
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00061
Fatty acid biosynthesis
phai00071
Fatty acid degradation
phai01100
Metabolic pathways
phai01212
Fatty acid metabolism
phai04146
Peroxisome
Module
phai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112885809
00071 Fatty acid degradation
112885809
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112885809
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phai01004
]
112885809
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112885809
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112885809
Lipid biosynthesis proteins [BR:
phai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112885809
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of breast milk
112885809
Exosomal proteins of breast cancer cells
112885809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Malic_M
Motif
Other DBs
NCBI-GeneID:
112885809
NCBI-ProteinID:
XP_025807249
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Position
3:complement(6811080..6816822)
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AA seq
670 aa
AA seq
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MEANPKNIFTIKVEDGKPGKDGHPAAGPVFRSILAKDGFPQLEPDMKTSWDVFRVAADKY
PNNRMLGWRPLKDGVPGPYLWKSYKEVYDEVLQVGSALQQLGVQPGSRVGIYGSNCPQWI
VAMQACNGYSLICVPLYDTLGAGAVDYIIDHAEIDVIFIQDKKIKEILSPNCKSAKRLKA
LVAFTSATREQIKDADEIGMKVYSWDDFLKVGKVNPCQPCPPQENDICTIMYTSGTSGQP
KGVMLTHESHALYVKGVDLFMDQFDDKMTTDDVFLSFLPLAHILDRMIEEYFFHKGASIG
YYHGDLNALRDDIQELKPTLLVGVPRVYERIYEGILKAIAELRPLRRVIFNALYNRKLAS
MKSGYSHKTASPFADMLAFRKVKARLGGRLRLLISGGAPLSTEIEEFLRVTTCAYFIQGY
GLTETLGPSTVCYIDDMALVGSVGVPATYTEIRLEEVPEMGYDPLGVPSRGEICIRGKSV
FAGYYKNPELTNEAIVDGWFHTGDIGEMTPDGILKVIDRKKNIFKMSQGEYVAVEYLEKV
YGFPPLVEDIWVYGDSFRSNLVAVVNPHEENTMKWAESNGYKGSFSEICKLEGLKEYILK
ELAAIAQKNKLRGFEYIKGIVLDPIPFDIERDLVTATMKKRRNNMLKYYQSEIDTIYKKL
ETQKNAAKAN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaatccgaagaacatcttcacgattaaagtggaagatgggaagcccggcaaa
gacggtcacccagcggcagggccagtgttccggagcatactggccaaggatggattccca
cagcttgagcctgacatgaaaacatcatgggatgtgttcagggtagcagcagacaagtat
cccaacaaccggatgcttgggtggcgtccacttaaagatggagtgccagggccctacttg
tggaaatcatacaaggaggtctatgatgaagtgctgcaagttggctctgcattgcagcag
ctcggagtgcaaccaggttccagggttggaatctatggatccaattgccctcagtggata
gtggcaatgcaggcttgcaatggctacagtctaatctgtgtcccactatacgatacttta
ggtgcaggagctgttgactacattattgatcatgctgagattgatgttatcttcatacag
gacaagaaaataaaagagatactatccccaaattgcaagtctgctaagaggctaaaagca
ttggtggcattcacttcggcaacaagggagcagatcaaagatgcagatgagattgggatg
aaagtgtactcctgggatgatttcttaaaagtgggaaaagttaatccttgtcaaccttgc
cctccgcaagaaaatgatatatgtactatcatgtatacaagtggaacaagcggacagccc
aaaggtgtgatgctgacccatgaaagccatgccctgtatgtaaaaggagtggacctcttt
atggatcagtttgatgataagatgacaacagatgatgtctttctatcctttctcccactt
gctcacattcttgaccgcatgatcgaagagtatttctttcacaaaggagcctcaattggc
tattaccacggagatttgaatgccttaagggacgatatccaggagctaaagccaactcta
ctagttggggtaccccgagtgtacgaaagaatttatgaaggtatcttaaaagccattgcg
gaactcagaccacttagaagggtgatttttaatgctttgtacaaccgcaaactggcaagc
atgaaatcaggctactcacacaaaactgcttcaccttttgcggacatgctggcttttcgc
aaggtcaaggcaaggcttggaggtcgtcttcgcttattaatctcaggaggggctccatta
agtactgagattgaagagttcttgagagtgaccacctgtgcatactttatccaaggctat
ggtttaacagaaacactgggacctagcacagtctgctatattgatgacatggccctggtt
ggaagtgttggcgtacctgccacttacactgaaatacgactggaagaagtacctgagatg
ggctatgatccacttggtgtcccttcacgaggtgaaatctgcatccgagggaagtctgtc
tttgctgggtactacaaaaatcctgagctcacaaacgaagccattgttgatggatggttt
catacaggcgacattggagagatgaccccggatggaatcctgaaggtaattgaccgaaaa
aagaacatatttaagatgtcacagggggaatatgttgcagttgagtacctcgagaaagta
tatggcttccctccacttgttgaagatatctgggtatatggggacagcttcagatcaaat
ttagttgcagtagtcaatccacatgaagaaaacaccatgaagtgggcagagtccaacggc
tacaaagggtctttcagtgaaatctgcaaacttgaaggccttaaggagtatatcctgaaa
gagctggcagctattgcacagaagaacaagctacgaggtttcgagtacatcaaaggcata
gtgttggatcctataccttttgacattgaaagggatctggtgacagcaacaatgaagaag
agaagaaacaatatgctgaaatattaccagtccgagatcgatacaatatacaaaaagctg
gaaacacagaagaatgctgccaaagctaattga
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