Panicum hallii (Hall's panicgrass): 112885834
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Entry
112885834 CDS
T07366
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112885834
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112885834
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112885834
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112885834
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112885834
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112885834
NCBI-ProteinID:
XP_025807285
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Position
3:14102448..14109379
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AA seq
640 aa
AA seq
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MAPTAEPPSPPPPRRPRTGPPPGLKNLGNTCYLNSVLQCLASTPPLATFCLASRHSNLCK
KIFPNRDKDCAFCVLERQIARLLRADAGALDSPAKIIRCMPLFAEHFRWGRQEDAHEFLR
YVVDACHTAGLRMRKRLPAAVANGNCGEEEGRGQGMCMIMRETFGGALLSQVKCLLCKGE
SNKTDDIMDISLDLPGSSSVADALARFFQPEILEGANKYSCERCKKLTSARKQMFILRAP
KVLVIQLKRFEGINGGKINRSIEFKEALVLSDFMYDKNQDSHPAYNLFGCIVHSGLSPDS
GHYYAYVKDAIGRWFCCNDSHVSLSSSQNVLSEKVYILFYILNSKNQKPSPNGCSSTAAK
PFSTNGSGISSTSPNETLKIPLIKQNGSCSTEGNALLPLKNGKIASGPLIKPIHFKNSGT
EKVKSNGKENLPSKMNPEVNESAIPSESNGHKTGKFAEPSKKDADGTMSCGKIDDHSERI
LQDANGNGHLIRSQYLGEASNGNATCAQQYSEQSSGAVASKSPVSHHEESAKVKDVANSS
KDSVHLKRQHEEDRFKEVLAKSASSELRLSVWVDDVSNFMRSQKRRRIQNPGIPQDIDAM
RKLLKSDSERIFRSKVPESLVESLIQRLRSYFESIYPPNP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaccgcggagccaccttcgccgccgcctccgcggcgcccccgcacgggcccg
cccccggggctgaaaaacctcggcaacacctgctacctcaacagcgtcctccagtgcctc
gcgtccacgccgcccctcgccacgttctgcctcgcctcgcggcactccaacctgtgcaag
aagatattcccgaacagggacaaggattgtgcattctgcgtgctcgagcgccagatcgcg
cggctcctacgggcagatgcaggggcgctcgactcgccagcgaagatcatccgctgcatg
cccctgttcgccgagcacttcagatgggggcgccaggaggatgcgcacgagttcctccgc
tatgtcgtagacgcctgtcacactgctggtctccgcatgcgcaagcggctacctgcggca
gttgccaatggaaactgtggtgaggaggagggccgggggcagggtatgtgtatgattatg
agggagacatttggtggggcgctgctcagtcaggtgaagtgtcttttgtgcaagggcgag
tcaaacaagacagacgatataatggatatcagtctcgatctacctgggagcagttctgtt
gctgatgcccttgcccgcttctttcagccggagatcttggagggtgcaaacaaatatagt
tgcgaaagatgtaaaaagctcacgtcagcacggaagcaaatgtttatactcagggcacct
aaggtgcttgtcatacaactcaagaggtttgaggggataaatggtggaaagatcaacagg
agtatagaattcaaggaggctcttgttctttctgacttcatgtatgataaaaaccaggat
tcacatccagcatataatctttttggttgtatcgtccactcagggctctcccctgattct
ggtcactactatgcgtatgttaaggatgctattggtcgatggttttgttgtaacgattct
catgtctccctatcaagctctcagaatgttttgtctgagaaggtctatatcctattttat
atactgaattcgaaaaatcaaaagcctagtccaaatggttgctcttctactgcagctaaa
cctttcagcaccaatggaagtggcatatcaagcacctcacctaatgagaccttgaagata
cctttgataaaacagaatggttcatgttctaccgaaggtaatgccctgctgcccctgaag
aatggcaagattgcatcaggtccacttatcaagccgattcactttaagaatagtgggaca
gagaaggttaagtcaaatggcaaagaaaacctcccttcaaaaatgaacccagaagttaat
gagagtgctataccatcagaatcaaatgggcacaagactggaaaatttgcggaacccagt
aaaaaggatgccgatggtactatgtcttgtggaaagattgatgatcattcagaaagaata
ttgcaggatgcaaatggaaatggccacctgattcgttcccaatatcttggcgaggccagt
aatggtaatgccacatgtgctcaacagtattctgagcagtcatctggtgctgttgcctct
aaaagtccagtttcacaccatgaagagtctgctaaagtaaaggatgtggcgaattcatcc
aaggatagcgtgcacctgaaacgccaacatgaagaagacaggtttaaggaagtgcttgct
aagtcagcttcttctgagcttcggctgtctgtttgggtggatgatgtcagtaattttatg
cgctcacaaaagagacggcgaattcaaaacccaggcattcctcaagatattgatgcaatg
agaaagctgctaaaatcagattctgaaagaatatttaggtcaaaagttccggagtcactg
gtggaaagtctcattcaacgcctgagatcatactttgagagcatatatccaccaaatcct
taa
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