Panicum hallii (Hall's panicgrass): 112885926
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Entry
112885926 CDS
T07366
Name
(RefSeq) protein SCARECROW-like
KO
K27742
protein SCARECROW
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112885926
Transcription factors [BR:
phai03000
]
Eukaryotic type
Other transcription factors
GRAS
112885926
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GFIT
Motif
Pfam:
GRAS
PEX14-like_2nd
RraB
TPP_enzyme_M_2
Motif
Other DBs
NCBI-GeneID:
112885926
NCBI-ProteinID:
XP_025807416
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All DBs
Position
3:669550..672773
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AA seq
665 aa
AA seq
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MGSSSLLLFPSSSSAAPPTASPHPAYSHATSSHSLLPPLPSSQDHLLLQYLHHLDQHQES
AAMVRKRPAPDMDLPPPRRHVTGDLSDVTAAAGGGQPHQSAASAQLPALPTQLQLPAFQQ
QQHHGHAEVDVPHAPPPAAAEVAASTTAWVDGIIRDIIGSSGGAGVSITQLIHNVREIIH
PCNPGLASLLELRLRSLLNADPALPPLPHPAALLHNTPPAAAPTVPALPPPPLPDKRRHE
PQPCQQEEPNPSPQSPKPPTAEETAAAAAAAAAAAAAAKERKEEQRRKQRDEEGLHLLTL
LLQCAESVNADNLDDAHQTLLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPL
PPASPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGL
QWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFYAVAEKAGN
VDPEKLGVTRREAVAVHWLHHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLA
RFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWR
EKLAQSGFRSASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWRPI
QTPCR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcctccctcctcctcttcccctcgtcctcctccgccgcgccacccacggcc
tcccctcaccctgcttattctcatgccacctcctcccactccttattgccgccgctcccc
tcctcccaagaccacctcctcctccagtacctccaccacctagaccagcaccaagaatcc
gccgccatggtccgcaagcgcccggcgcccgacatggacctcccgccgccgcgccgccac
gtcacgggtgacctctccgacgtcaccgccgccgctggcggtgggcagccgcatcagtcg
gccgctagcgcgcagctgcccgcgctgcccacccagctccagctccccgcgttccagcag
cagcagcaccacgggcacgcggaggtggacgtcccccacgcgcccccgcctgcggcggcc
gaggtggcggcgtccaccacggcgtgggtggacggcatcatccgcgacatcatcggcagc
agcggcggcgccggggtctccatcacgcagctcatccacaacgtccgcgagatcatccac
ccctgcaaccccggcctagcctcgctcctcgagctccgcctccgctccctcctcaacgcc
gaccccgccctgccgccgctcccgcatcctgctgctctcctgcacaacaccccgcccgcc
gccgccccaacagtgcccgctctccctcctcccccgcttccagacaagcgccgccacgag
ccgcagccgtgccagcaggaggagccgaatccgtccccgcagtcgcccaagcccccgacg
gcggaggagaccgccgccgccgccgccgccgccgccgcggctgctgcagccgcgaaggag
cggaaggaagagcagcggcggaagcagcgcgacgaggagggcctccacctgctgacgctg
ctgctgcagtgcgccgagtcggtgaacgcggacaacctcgacgacgcgcaccagacgctg
ctggagatcgccgagctcgccacgcccttcggcacctccacgcagcgcgtcgccgcctac
ttcgcggaggccatgtccgcgcgcctcgtcagctcctgcctcggcctgtacgcaccgctg
ccgccggcgtcccccgccgcagcgcgcctgcacggccgcgtcgccgccgcgttccaggtg
ttcaacggcatcagccctttcgtcaagttctcgcacttcacggcgaaccaggccatccag
gaggcgttcgagcgggaggagcgcgtccacatcatcgacctcgacatcatgcaggggctc
cagtggccgggcctcttccacatcctcgcctcccgccccggcggcccgcccagggtcagg
ctcaccgggctcggcgcgtccatggaggcgctcgaggccacggggaagcgcctctccgac
ttcgccgacacgctgggcctgccattcgagttctacgccgtggcggagaaggccggcaat
gttgacccggagaagctgggcgtcacgcggcgcgaggccgtcgccgtccactggctacac
cactcgctctacgacgtcaccggctccgactccaacacgctctggctcatccaaaggctg
gcccccaaggtggtgacaatggtggagcaggacctcagccactcaggctccttcctggcg
cgcttcgtggaggccatccactactactcggcgctgttcgactcgctggacgcgagctac
ggcgaggacagcccggagcggcacgtcgtggagcagcagctcctatcgagggagatccgc
aacgtgctcgccgtgggcgggccggcgcgcaccggcgacgtcaagttcgggagctggcgc
gagaagctcgcgcagtcggggttccgctcggcatcgctcgccggcagcgcggcggcgcag
gcgtcgctgctgcttggcatgttcccctccgacgggtacacgctcgtcgaagagaatggt
gctctgaagctcgggtggaaggatctttgcctgctcactgcatctgcttggcgcccaatt
cagaccccatgccgttaa
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