Panicum hallii (Hall's panicgrass): 112885961
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Entry
112885961 CDS
T07366
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112885961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112885961
03016 Transfer RNA biogenesis [BR:
phai03016
]
112885961
03012 Translation factors [BR:
phai03012
]
112885961
04131 Membrane trafficking [BR:
phai04131
]
112885961
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112885961
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112885961
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112885961
Translation factors [BR:
phai03012
]
Eukaryotic type
Elongation factors
112885961
Membrane trafficking [BR:
phai04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112885961
Exosome [BR:
phai04147
]
Exosomal proteins
Proteins found in most exosomes
112885961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
112885961
NCBI-ProteinID:
XP_025807468
LinkDB
All DBs
Position
3:21317829..21320574
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AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtcccacatcaacatcgtggtcattggccacgtcgactccggcaag
tcgaccaccaccggccacctgatctacaagcttggaggcatcgacaagcgtgtgatcgag
aggttcgagaaggaggccgcggagatgaacaagaggtccttcaagtacgcgtgggtgctt
gacaagctcaaggccgagcgtgagagaggtatcaccattgatatcgccctgtggaagttc
gagaccaccaagtactactgcactgtcattgatgcccctggtcaccgtgacttcatcaag
aacatgatcacgggtacctcccaggctgactgtgctgtccttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctccttgct
ttcactcttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactccaaggcccgttatgatgaaattgtgaaggaagtctcctcctacctcaagaag
gttggctacaaccctgacaagatcgcctttgtccccatctctggttttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggcccaaccctgctcgaggctctt
gaccagatcaacgagcccaagaggccttcggacaagcccctgcgtctcccccttcaggat
gtgtacaagattggtggtattggaactgttcctgttggccgtgttgagaccggtatcatc
aagcctggtatggttgttacctttggtcccagcggtctgactactgaggtgaagtctgtt
gagatgcaccatgaggctctccaggaggctcttcctggtgacaatgttggcttcaacgtg
aagaacgttgccgtgaaggatctgaagcgtgggtatgtggcctccaactccaaggatgac
cctgccaaggaggctgccagcttcacctcccaggtcatcatcatgaaccaccctggacag
atcggcaacggctatgccccagtgctggactgccacacctcccacatcgccgtcaagttt
gctgagctcgttaccaagatcgacaggcgatctggtaaggagcttgagaaggagcccaag
ttcctcaagaacggtgatgctggtatggttaagatggttcccactaagcccatggtggtg
gagaccttctctgagtaccctcctcttggtcgtttcgctgtccgtgacatgaggcaaaca
gttgctgttggtgtcatcaagagtgtggagaagaaggacccgactggtgccaaggtgacc
aaggctgcggccaagaagaaatga
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