Panicum hallii (Hall's panicgrass): 112885962
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Entry
112885962 CDS
T07366
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112885962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112885962
03016 Transfer RNA biogenesis [BR:
phai03016
]
112885962
03012 Translation factors [BR:
phai03012
]
112885962
04131 Membrane trafficking [BR:
phai04131
]
112885962
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112885962
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112885962
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112885962
Translation factors [BR:
phai03012
]
Eukaryotic type
Elongation factors
112885962
Membrane trafficking [BR:
phai04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112885962
Exosome [BR:
phai04147
]
Exosomal proteins
Proteins found in most exosomes
112885962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
112885962
NCBI-ProteinID:
XP_025807469
LinkDB
All DBs
Position
3:21209538..21212315
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtcccacatcaacatcgtggtcattggccacgtcgactccggcaag
tcgaccaccaccggccacctgatctacaagcttggaggcatcgacaagcgtgtgatcgag
aggttcgagaaggaggccgctgagatgaacaagaggtccttcaagtacgcgtgggtgctt
gacaaactcaaggccgagcgtgagagaggtatcaccattgatatcgccctgtggaagttc
gagaccaccaagtactactgcactgtcattgatgcccctggacaccgtgacttcatcaag
aacatgatcacgggtacctcccaggctgactgtgctgtccttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctccttgct
ttcactcttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactccaaggcccgttatgatgagattgttaaggaagtctcctcctacctgaagaag
gttggctacaaccctgacaagatcgccttcgtccccatctctggttttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggcccaaccctgcttgaggctctt
gaccagatcaacgagcccaagaggccttcggacaagcccctgcgtctcccccttcaggat
gtgtacaagattggtggtattggaactgtccccgttggccgtgttgagaccggtatcatc
aagcctggtatggttgttacctttggtcccagcggcctgactactgaggtgaagtccgtt
gagatgcaccacgaggctctccaggaggcccttcctggtgacaatgttggcttcaacgtg
aagaacgttgccgtgaaggatctgaagcgtgggtatgtggcctccaactccaaggatgac
cctgctaaggaggctgccagcttcacctcccaggtcatcatcatgaaccaccctggacag
atcggcaacggctacgccccagtgctggactgccacacctcccacatcgctgtcaagttt
gctgagctcgttaccaagattgacaggcgatctggtaaggagcttgagaaggagcccaag
ttcctcaagaacggtgatgctggtatggttaagatggttcccaccaagcccatggtggtg
gagaccttctctgagtaccctcctcttggtcgttttgctgtccgtgacatgaggcaaacg
gttgctgttggagtcatcaagagcgtggagaagaaggacccaaccggcgccaaggtgacc
aaggctgctgccaagaagaaatga
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