Panicum hallii (Hall's panicgrass): 112885972
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Entry
112885972 CDS
T07366
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112885972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112885972
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112885972
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112885972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
112885972
NCBI-ProteinID:
XP_025807483
LinkDB
All DBs
Position
1:321158..342601
Genome browser
AA seq
1151 aa
AA seq
DB search
MTVPPADDAAKKELPPPSYRSLAAPVATPVDKFALLPAFLKVRGLVKEHIDSFNYFTTRG
IRNIVEANNRIEARNDPSIYLRYTNVYVGTPSVQVDYKIENITPHFCRLTDRTYSAPIRV
DIEYTVGKQHEPQHKKNVLIGYLPIMLRSYACVLHGRDEAELARQGECPLDPGGYFIVKG
TEKVILIQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVITMDKEKIYLQLNQFTKP
IPIIVVMKAMGMESDQEVVQMVGRDPRYGDLLFPSIQECASEAIYTQQQALQYMDEKVTY
PGAGNQKEGRSKSILRDVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNADTFDDKDYV
GNKRLELSGQLISLLFEDLFKTMNSQAVELMNKNSDKTRSSPSDFSQLIKHEAITSGLER
AISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWG
MLCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLTLLSGEEIHAPGSF
LVMFNGLILGKHRQPQTFANAMRELRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLI
IADKGISRVKECHMKELRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHVDQDDVERS
SITHIEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLL
VYAQRPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIAM
KKYTVMKENYGDGVSDRIAKPQRDKDGVLLRQNMRALDEDGIAAPGQIIRNHDVYVNKQS
PKIVDRRGAGALLKDMDYKDSLAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHTRRP
EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIGGKA
GLSCGRFHYGSAFGEPSGNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIFMGP
IYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFE
RLLLSSDPYQVQVCRKCGLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQELQAM
NVVPRLKLTEG
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgccccccgcggacgacgcggccaaaaaggagctgccgccaccgtcctatcgc
tctctggccgccccggtcgccacccccgtcgacaagttcgccctcctcccagcattcctc
aaggtccgagggctcgtcaaggagcacatcgactccttcaactacttcaccaccagggga
atccggaacatcgttgaggcaaacaatcgaattgaggcgcgcaatgacccatccatttac
cttaggtacaccaacgtctatgttggcacgccctcagttcaagtggattacaaaatcgaa
aatatcacgccccacttttgccgccttactgaccgcacttattctgctcctataagagtt
gatattgaatatactgtcgggaagcagcatgaaccgcagcataagaaaaacgttctcatt
ggctacctgcccattatgcttagaagttatgcatgtgttctgcatggaagggatgaagct
gaactagcaagacaaggtgagtgccctcttgatcctggtggctacttcattgtcaaagga
actgagaaggtcattttaatacaagaacagctatcaaagaatcgtattattatcgacacc
gatagtaaaggaagggtgattgcatctgttaccagcagcacacatgaaattaaaagcaag
acggtgattactatggataaggagaagatctatctacagctgaatcaattcacgaaaccg
attccaataatagtggtcatgaaagctatgggaatggaaagtgatcaagaggttgtacaa
atggttggaagagatccaagatacggagacctcttattcccatctattcaggaatgtgcc
tcagaggcaatatatacacaacagcaagccctgcagtacatggatgagaaggttacgtat
cctggtgcaggaaatcagaaggagggtcggtcaaaatcaatcctacgcgatgtatttatt
gcacatgtgccggttaagaacgggaacttccgacaaaaatgtatatacactggcgtaatg
ttaaggcgcatgatggatgcaatcttgaatgctgacacctttgatgataaggattatgta
gggaataagaggctggagttgtctggtcaactaatatccctgctttttgaggatttgttc
aaaacaatgaattcccaagctgtagagctcatgaacaaaaatagtgacaagactcgttct
agtccttcagattttagccagttgataaagcatgaagccataacctctggtttggagagg
gctatttctacaggaaattgggatatcaaaaggtttcggatgcataggaaaggtgtatca
caggttctttctaggctatcgtacatggcatcgttaggctacatgacacggataacaccg
cagtttgagaagactaggaaaacaagtgggccacgtgctttgcaacctagtcagtggggc
atgctttgcccatgtgatactcctgaaggagaagcttgtggattaacgaaaaatttagct
ctgttgactcacgtgacaacagatcaagaggaaggcccgctgatgaatctgtgtaagagt
cttggcgtggaagatttaacgcttctgtctggagaagaaatacatgcaccgggttcattt
ttggtgatgttcaatggattaatactggggaaacataggcagcctcagacatttgctaat
gctatgagagagttgcgtcgatcaggcaaaattggagagttcgtaagcatttttgtaaat
gagaaacagcattgcattcacattgcctctgatggtggtcgtgtatgtcgcccacttata
attgctgataaggggatatcaagggtcaaagagtgtcatatgaaagaactgagggatggt
attcgttctttcgatgattttctgcgtgatggattgatcgaatatcttgatgtcaatgaa
gagaacaatgcgttgattgcattgtatgaacatgtggatcaagatgatgttgaaagaagc
agcatcacacatattgaaatagagccattgtctatcttaggagttgtatccggacttatt
ccgtatccacaccataaccaatctccacgtaatacttatcagtgtgcgatgggtaagcaa
gctatgggaaatattgcatataatcagttgttcagggcagattcgctactctacttactg
gtgtacgcacaacgaccactgctaacaacaaaaacaattgagttggtgggatacgacaag
cttggtgctgggcagaatgccactgttgctgtcatgggttatagtggatatgatattgaa
gatgcaattgtaatgaataaatcatcccttgatcgaggttttggtcgttgcatagcaatg
aaaaagtatacagttatgaaggagaactatggagatggtgtctctgataggattgctaaa
ccgcaaagagataaagatggtgttttgttaaggcagaatatgcgggcacttgatgaggac
ggtattgctgcacctggccaaataattcgcaatcatgacgtctatgtgaacaagcaaagt
cccaaaattgtagatagaagaggtgctggtgcactgttaaaagacatggactacaaggac
tcactggccatttacaagggtgttgatggcgagactactgttgtagatcgtgtaatgctt
tgttcagatacaaatgagaaactgtctattaagtgcattatccgccatacaaggaggcca
gaggttggtgataaatttagtagcagacatgggcagaaaggtgtttgtggtaccattgtt
cagcaggaggacttccccttctctgagaggggaatatgccctgatttaattatgaatcca
catggattccctagtcgaatgactataggtaaaatgattgaacttattggtggaaaggct
ggtttgtcttgtggtcgattccattatggcagtgcatttggtgaaccaagtggtaacgct
gataaagttgaagacataagcaatactctaatcaagcatggcttcagctataatggaaaa
gatttcttgtactcaggtattctaggtcatcctctggaggcatacatcttcatgggtcca
atctactatcagaaactgaagcacatggttcttgataagatgcatgctcgagctagtgga
ccacgagtgttgttgaccaggcagcctactgaagggcgaagtcgagatggaggtctccgt
cttggtgaaatggagcgtgattgtttgattgcgtatggtgctagcatgctgatctttgaa
cgtctactactatctagtgatccatatcaagtccaggtttgcagaaaatgtggcttgttg
gggtactacaactataaactgaagacttcgtactgttcaatgtgcaagaacggagaaaac
atggccaagatgaggctgccatatgcctgcaagcttttgttccaggaattgcaagcaatg
aatgtcgttccacgattaaagctaaccgaaggataa
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