Panicum hallii (Hall's panicgrass): 112885993
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Entry
112885993 CDS
T07366
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112885993
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112885993
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
112885993
NCBI-ProteinID:
XP_025807507
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Position
3:complement(981297..985440)
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AA seq
690 aa
AA seq
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MAASAAGATRSLLVVVTLLIAVAGAPSSSSSLLRIAAAAATPLNAAAAHGGVTLRVDRRQ
VLVDNGVVQVTLSKPQGHITGVRYNGERNLLHYAGEENSGGYWDVVWNYPGSDHPRGMID
MLESTEFKIVSSSQEQVELSFRSTYNPSRQDNVRLNVDKRLVMLKGSSGFYCYAIFEHTG
NWPAMNISEARLAFKLNTDKFNYMAISDNIQRYMPSAADRDEPHGTPLAYKEAVLLTNPK
EPQFKGEVDDKYEYSLDNKDNVVHGWISSCHPNPMGFWVITPSNEFKSGSPMKRELTSHV
GPTSLTMFLGTHYIGDDIVLSIGDGEYWKKVLGPVFIYLNSSPKRGDLRALWDDAKAQAQ
NEVSKWPYSFPKSPDFPKAGERGSVTGRLLVRDRFMSNDDMPTGRLAYVGLAAPGQPGSW
ATECKGYQFWTTADSCGSFTIGNVRAGVYDLYAWVPGVLGDYMYTSHVTVTPGCPINLGD
LVFLPPRSGPTLWEIGVPDRTAAEFFVPDVDPRYANRLFLHKDKYRQYGLWERYAELYPD
CDPVFTVGQSNHSKDWFFAHVTRKVGDGYVPTTREIRFSLDRVVADGTYTLRIALAAAQM
SRLQVHVNGARSGGVFTTPEFGGGNAIARHGIHGVQWSFEFPIRGYLLQEGENSISITQT
RAFGEFLGVMYDYVRLEGPPGSWRDPTRRA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttccgcggcaggtgcgacaaggtcattactggtggtggtcaccctgcttatc
gccgtcgccggagcgccctcgtcgtcgtcgtccctgctgcgcatcgccgccgccgctgcc
acgccgttgaacgccgccgcagcccatggcggcgttacgttgcgcgtcgaccgccgccag
gtgcttgtggacaacggcgtggtgcaggtgacgctgtccaagccccagggccacatcacc
ggcgtccgctacaacggcgagcgcaacctcctgcactacgccggcgaggagaactcggga
gggtactgggatgtggtgtggaactatccgggctccgatcacccaagagggatgatcgac
atgttagagagtactgagttcaagatcgtgtcctcaagccaagagcaagtggagctttct
ttcaggagtacatataatccatcacgtcaagataatgttcgcctcaacgttgacaagaga
cttgtgatgctgaaaggcagctccgggttctattgctacgccatctttgagcacaccggc
aactggcccgccatgaacatctcagaggctcggctcgctttcaaacttaacacggacaag
ttcaactacatggcgatttcagacaacatacagagatacatgcccagcgcggcagacaga
gacgaacctcatggtactccactggcctacaaggaggcagtcctgctcactaaccccaag
gagccacagttcaagggagaggtggatgacaagtatgagtactcactggacaacaaggac
aatgtcgtccacggatggatcagtagctgccaccccaaccccatgggcttctgggtgatc
actccaagcaacgagttcaagagcggcagccccatgaagcgggagctcacctcccacgtc
ggacccacctccctcaccatgttcctgggaacgcattacattggggacgacatcgtcctc
agcatcggcgacggcgagtactggaagaaggtgttggggccagtcttcatctacctcaac
tccagcccgaagcgaggcgacctccgtgccctctgggacgacgccaaagcgcaagcgcaa
aacgaagtcagcaagtggccgtacagcttccccaaatcaccggacttccccaaggccggg
gagagaggctcggtcaccggcaggctattggtcagagacaggttcatgagcaacgacgac
atgccaaccgggagattggcgtacgtcgggctcgccgcgcccgggcagcccggctcctgg
gcgacggagtgcaagggctaccagttctggacgacggccgattcctgcggcagcttcacc
atcggcaatgtccgggcgggagtgtacgatctctacgcatgggtcccgggggttcttgga
gactacatgtacacttctcatgtcaccgtgacgccaggttgccccatcaacctcggcgat
ctcgtgttcttgcccccgaggtcaggcccgacgctgtgggagatcggagtcccggaccgg
accgcggcggagttcttcgtccccgacgtcgaccccagatacgccaaccggctgtttctg
cacaaggacaaatacaggcagtacggtctgtgggaaaggtacgccgagctgtaccctgac
tgcgatcctgtcttcacggtcggccagagcaatcactccaaggactggttctttgcgcac
gtcacgaggaaggtaggcgatggctacgtgccaacgacgcgtgagatccggttcagcctg
gaccgcgtcgtggcagacggcacctacacgctgcgcatcgcccttgcagctgctcagatg
tccagactgcaggtgcacgtgaacggcgcgaggagcggcggggtgttcacgacgccggag
ttcggcggcggcaacgcgatcgcgcggcacggcatccacggcgtgcagtggagcttcgag
ttcccgatcagggggtacctgctgcaggaaggcgagaacagcatcagcatcacgcagacg
agggcattcggcgagttcttgggggtcatgtacgactacgtccggctggaagggcctccc
ggatcctggcgagaccccacgcggcgggcgtga
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