Panicum hallii (Hall's panicgrass): 112886004
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Entry
112886004 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112886004 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112886004
Enzymes [BR:
phai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112886004
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112886004
Prokaryotic type
112886004
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
112886004
NCBI-ProteinID:
XP_025807521
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All DBs
Position
3:3401803..3407861
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AA seq
442 aa
AA seq
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MAMFSMVNWQMQGLQWQIGEARCWKYCNGKKLPTRAAIAMSTSKPAAAAATSTKRPCDPA
DPTPPAKLQRSSDPPDPAPAGNPDGATDGGEATGLDSEGMAGARNPRAQRYLVAVEYVGT
RFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRK
PGEVLTPHEPGVVKRAVNHFLQRNEGDIMVTDVRYVAPDFHARYKALERTYHYRLLSGPE
STSVFEKSSAWHISEDLDIHAMKKACSILVGHHDFSSFRAAGCQVILSLTIQYCLQANSP
MRTLDELTVTEVFPFMFFPSNIERSEMESSDGSLVYSRKPALESSGKESDGSCSSSVKSE
SKNRKEFGSRQRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGNLTTADVERILNAKTVT
AGPPMAPACGLYLANVKYDLSV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttttctatggtaaattggcaaatgcaaggtttgcaatggcaaatcggcgaa
gccagatgctggaagtactgtaatggcaaaaagctccccacccgtgccgcaatcgccatg
agcaccagcaaacccgccgccgccgccgccacctcaaccaagcgcccctgtgatcccgcc
gaccccacgccgccggccaagctccagcgatcctccgacccgccggaccccgcgccggcc
gggaacccagacggtgccaccgacggcggcgaggcgacgggattggatagcgaggggatg
gccggtgcacggaaccctcgggcgcagcggtacctggttgcggtggagtacgtcggcacc
cgcttctccggctcccagcagcagctcaaccagcggaccgtcgtcggcgttctcgaggag
gcatttcacaaattcattggccagccagtttcgatattctgttctagccgaacggatgca
ggtgttcacgctttatcaaatgtttgccatgttgatgtggagcggataagtaaaaggaag
cctggtgaagtgttaacacctcatgagcctggagttgtaaaacgcgctgtgaaccatttt
ctacagaggaatgaaggtgacataatggtgactgatgttcgctatgttgcaccagatttt
catgctagatacaaagctctagagcgcacatatcactatcgtttgctttctggacctgag
tcaacatcagtattcgagaaaagctctgcttggcacatatctgaggatttggatattcat
gcaatgaagaaagcatgcagcatacttgttgggcatcatgatttcagttcgtttcgggca
gctggatgtcaggtgatattatccttaactattcaatactgcttgcaggcaaactcacca
atgagaactctggatgaacttactgttacagaagtattccctttcatgttttttccttca
aacatagaacgatcagagatggaatcatcagatggatctcttgtttattcgaggaaacca
gccttggaatcatctgggaaagaatctgatggttcctgttctagcagtgtgaaatcagaa
tctaagaacagaaaagaatttggatcaaggcaaaggcaccgctgctttgttgttactgca
agggcgcgatcttttctttaccatcaggtaaggttgatggtcggtcttctaaaatctgtt
gggacgggcaatctaacaactgcagatgttgagagaattttgaatgcaaagacggtgaca
gctggacctcctatggcacctgcttgtggcctgtaccttgctaacgtgaaatacgacctg
agcgtttga
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