Panicum hallii (Hall's panicgrass): 112886016
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Entry
112886016 CDS
T07366
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00061
Fatty acid biosynthesis
phai00071
Fatty acid degradation
phai01100
Metabolic pathways
phai01212
Fatty acid metabolism
phai04146
Peroxisome
Module
phai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112886016
00071 Fatty acid degradation
112886016
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112886016
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phai01004
]
112886016
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112886016
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112886016
Lipid biosynthesis proteins [BR:
phai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112886016
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of breast milk
112886016
Exosomal proteins of breast cancer cells
112886016
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112886016
NCBI-ProteinID:
XP_025807538
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Position
3:2704170..2709380
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AA seq
698 aa
AA seq
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MNPYFVGFLVPVAVSLLLRKRRKAERKRGVQVEVGGEPGYAVRNYRFEQPVETHWEGVST
LAELFEQSCKEYVYMPLFGTRKLISREIESAPGGRSFEKLHLGEYEWKCYAEAFKSVRDF
SSGLIRLGHQKNERVAIFAETKAEWQVALQACFRQNITVVTIYASLGEEALCHSLSETEV
TTVICGQKELKKLIDISGQLDTVTRVVYINEEGISDEVSLARNSTSWIIESFDEVGRLGT
EAPVEANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPALGSKDIYLAY
LPLAHILELAAEALMAAVGASIGYGSPLTLTDTSNKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDATGGVAKKLFDIGYNRRLAAINGSWLGAWGLEKLLWDTLVFGKVRAIL
GGKIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPL
PCSYIKLIDWPEGGYLITDSPMPRGEIVIGGPNVTKGYFRNEAKTNEVYKDDEKGMRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMVHADPFHNYC
VALVAAARNELESWASQQGITYSDFSDLCQKEEAVKEVLGSLAKAAKQARLERFEIPAKI
KLIPEPWTPESGLVTAALKLKREVIRKTYENDLAQLYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttattttgttggtttccttgtccccgtcgcggtctccctgctgctccgcaag
aggagaaaggccgaaaggaagaggggagtgcaagtcgaggttggtggagagcctggatat
gcagtccgtaactatcggtttgaacagcctgttgagacacactgggaaggggtgtccacc
cttgctgagcttttcgagcaatcttgcaaggagtatgtctacatgcccctctttggcacc
aggaagctcatttcgagggaaattgaatcagcacctggtggaagatcatttgagaagctt
catcttggcgagtatgaatggaagtgttacgctgaggccttcaagagcgtccgtgacttc
tcatctggcctaattcgattaggccaccagaagaatgagcgtgttgcaatttttgctgag
acgaaagctgaatggcaggttgctttgcaggcatgcttcagacaaaatattacagttgtc
accatctatgcctcattgggagaggaagcattgtgccactcactaagtgagactgaggtc
actactgtaatttgtggtcagaaagaactaaaaaagttgattgatataagtgggcagctt
gacactgtaacacgtgttgtatatatcaatgaggaaggcatctcggatgaagtttcttta
gctcgaaacagcactagctggataattgagtcatttgatgaagtgggtaggttaggaact
gaagcacctgttgaagcaaacatgcctctcccatctgatgttgcagtgataatgtacaca
agtggtagcaccggattacccaagggagttatgatgacccaccgcaatgtcctggctaca
ctctcagcagttatgacaatagtgcctgcacttggtagtaaagatatatacttggcctac
ctcccacttgcacacattcttgagctggcagctgaggcactaatggctgctgtcggggcc
tccatcggatacggatcacctttgaccctgactgatacatcgaacaaaataaaaaaggga
actctaggtgatgcttcggcactgaaaccaacattgatgactgctgtacctgctatactt
gatcgtgttcgtgatggtgtgaggaaaaaggtggatgctacgggtggtgtagcaaagaaa
ttgtttgacattggctataaccggcggcttgcagcaatcaatggaagctggcttggtgcc
tggggattggagaaactcttgtgggatacgcttgttttcggaaaggtgcgtgcaattttg
ggaggaaagattcgttttgtactctcaggtggagcacctctatctggggatactcagaga
tttatcaatatatgccttggggctccaatagggcaagggtatggtctgactgaaacttgt
gctggtggtacattttctgagtatgatgatacatctgttggccgtgttggtgctccacta
ccttgttcatatattaagttgatcgactggcctgaaggtggatacttaataactgattca
cctatgcctcggggagaaatagtcatagggggtcctaatgtaaccaaaggctacttcagg
aatgaagccaaaacaaatgaagtttacaaggatgatgaaaaaggtatgcggtggttctat
tctggtgacattggacgtttccatccagatggctgccttgaaatcattgaccgtaagaaa
gatattgtgaagcttcaacatggcgaatatgtatctctggggaaggtggaggctgctttg
attgtgagcccatatgtggagaatatcatggttcacgctgatcctttccacaactactgc
gttgcacttgtggcagctgcacgcaatgagctggagagctgggcttcgcagcaaggaatt
acatatagtgatttctcagatttgtgccagaaggaagaggctgttaaagaagtgcttgga
tctttagcaaaggctgcaaagcaagctcgacttgagaggtttgagatcccagccaaaatc
aagttgataccagagccatggacccccgagtcgggcctcgtcactgctgcccttaagctc
aagagggaggtgatcaggaagacgtatgagaatgatctggctcagttgtatgcctaa
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