Panicum hallii (Hall's panicgrass): 112886018
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Entry
112886018 CDS
T07366
Name
(RefSeq) protein argonaute 4B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112886018
03036 Chromosome and associated proteins [BR:
phai03036
]
112886018
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112886018
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112886018
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112886018
microRNA pathway
RISC loading complex
112886018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112886018
NCBI-ProteinID:
XP_025807540
LinkDB
All DBs
Position
3:complement(9733176..9739877)
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AA seq
906 aa
AA seq
DB search
MGSHDGEADELPPPPPVPPNVVPIKADDVLGESPPNKPVKPKKLPMVRPGVGRKGQPIQL
YSNHFKVLVKSTEDFFFHYDVKLKYEDGRPVDGKVVGRKVIDKLQQTYHCELSNKDFAYD
GEKSLFTVGALPQVNNEFTVVLEDTSTVKTAANGSPEGNDSPGGGDRKRVRRSYQPKTFK
VELTFAAKIPMSAIGQAIRGEESENSLEALRVLDIILRQHSAKQGCLIVRQSFFHNNPSN
FVDLGGGVMGCRGFHSSFRGTQSGLSLNIDVSTTMIVKPGPIFDFLLANQKVDHPSRIDW
QKAKRALRNLRIKTIHSNGEFKIVGLSEQNCKEQTFPLKQRDGSNDTVEITVYDYYMKKG
IELRYSGDFPCINAGKPKRPTYFPIELCSLVPLQRYTKALSTLQRSSLVEKSRQKPDERM
RVLNDALQHSNYDSDPMLRACGISVAPKFTQIEGRILQAPKLKAGNGEDIFPRNGKWNFT
NKKLIQTCSVDKWAVVNFSARCDIQNLIRDLMRNASAKGIQMDEPFEVFEESPSMRRAPV
SRRVDDMFEQIKSKLPGAPRFLLCLLPERKNCEVYGPWKRKCLAEFGIVTQCLAPTRVND
PYLLNLLMKINAKLGGMNSLLQIEASRAIPHVSNVPTIILGMDVSHGHPGQDRPSIAAVV
SSCQWPHISKYRASVHTQSARQEMMASLFKPRGTEDDGLIRESLIDFYTSSGKRKPDHVI
IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTGSPENVP
PGTVVDNKVCHPRNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADDMQEFVHSLSYVYQ
RSTTAISVVAPICYAHLAAAQIGTFLKFEEMSDASSSQGGHTSVGSAPVPELPRLHEKVR
SSMFFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcatgatggtgaggctgatgagttgccaccaccccctccggtgccaccaaat
gtggtgccgattaaagctgatgatgttttgggggaatcgccaccaaacaaaccagtaaag
cctaagaaactaccaatggtcaggcctggtgtaggacgaaaagggcaaccaatccagctc
tattcaaatcactttaaagtcttggtgaagagtactgaagactttttctttcactatgat
gtgaagttgaagtatgaggatggtcgacctgttgatgggaaagtggtaggcagaaaggtg
attgataaactgcagcagacatatcactgtgagctttctaacaaggactttgcatatgat
ggagaaaagagcctgtttacagttggtgctcttccacaagtaaacaatgagttcactgta
gttttggaggacacgtcaactgtaaagactgctgccaatgggagccctgaaggaaatgac
agtcctggaggtggtgacaggaagagagtgaggagatcataccagccgaagactttcaaa
gtcgaattaactttcgcagcaaaaattcctatgagcgctataggtcaagccattagaggt
gaagaatcagagaactccctggaggctctccgtgttcttgatatcatactgaggcagcat
tctgcaaaacagggctgtcttatagtcaggcagtcatttttccataacaacccttcaaac
tttgttgacttgggaggtggtgtgatgggttgtcgtggatttcattcaagctttcgtggc
acacagagtggactttccctgaacattgatgtttcaacaacaatgattgtgaagccaggt
cctatttttgattttcttcttgctaaccagaaagttgatcatcctagcagaattgactgg
caaaaggccaagcgtgctctcaggaatttgaggattaaaacaattcattcgaatggagaa
ttcaagattgttggtcttagtgagcagaattgcaaggaacagacgtttccactgaagcag
agggatggtagcaatgatactgttgaaataaccgtctatgactactatatgaagaaagga
atcgaactgcggtattctggtgattttccttgtataaatgctgggaaaccaaagcgccca
acatattttcccattgagctgtgcagccttgttcctttacaaagatacaccaaagctttg
tctacgctacaaaggtcatccctagttgagaagtctagacaaaagcctgatgaaaggatg
agagtccttaacgatgcactgcaacatagtaactacgattccgaccccatgctgagggcg
tgtggtatttcagttgctccgaagtttacccaaattgaaggaaggatcctgcaagccccg
aagctgaaagccggcaacggtgaagatatcttcccacgaaatggaaagtggaatttcacc
aataaaaagctaattcaaacatgctctgtggataagtgggcggttgttaatttctcagca
cgttgtgatattcagaatcttattcgtgacctgatgagaaatgcatctgcaaagggaatt
caaatggacgaaccttttgaggtgtttgaagagagcccctctatgaggcgtgcccctgtg
tcaagaagagtggatgatatgtttgaacagataaaatcaaaacttcctggagctccaagg
ttcctcttgtgccttctccctgagaggaaaaattgtgaagtctatggtccctggaagaga
aagtgcctagctgaatttggtattgtcacacaatgtctagcaccaacaagagtcaatgat
ccttacctgcttaatttgctgatgaagattaatgcaaagcttggcgggatgaactcgttg
ctgcaaattgaagcatctcgtgcaattcctcatgtgtcgaacgtacccaccatcatcttg
ggtatggatgtgtcgcatggtcatccaggacaagatagaccttcaattgctgcggtggtc
agctcttgtcaatggcctcatatctctaaatatagagcttcagtgcacacccaatctgcc
aggcaagaaatgatggcctccttgtttaagccacggggaactgaagatgatggcctcatt
cgggaatcactgattgacttctacactagctctggaaagcgaaaacctgaccatgttatt
attttcagggatggagttagtgaaagccaatttacccaggtcataaacattgaacttgat
cagatcattgaggcatgcaagtttctcgatgagaagtggtcacccaagttcactgtaatt
gtagctcaaaagaatcatcataccaagttttttcagactggatctccagagaacgttcct
ccaggtactgtagtggacaacaaagtctgccatcctaggaactttgacttctacatgtgt
gcacatgctgggatgattggaacaacaaggccgacacattatcatgttctccacgatgag
ataggcttctctgctgatgacatgcaggagtttgttcattcgctctcttatgtgtatcaa
aggagcacaacggccatctctgtagttgctccaatctgctatgcccatcttgccgcagcg
cagataggcacgttcctgaaattcgaggagatgtcagatgcctcctccagccagggaggg
cacacctcggtgggcagtgcacctgtgcctgagctgccacgtctgcatgagaaagttagg
agctccatgtttttctgctga
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