Panicum hallii (Hall's panicgrass): 112886141
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Entry
112886141 CDS
T07366
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112886141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112886141
03110 Chaperones and folding catalysts [BR:
phai03110
]
112886141
03029 Mitochondrial biogenesis [BR:
phai03029
]
112886141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112886141
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112886141
Messenger RNA biogenesis [BR:
phai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112886141
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP60 / Chaperonin
112886141
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112886141
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112886141
Exosomal proteins of other body fluids (saliva and urine)
112886141
Exosomal proteins of breast cancer cells
112886141
Exosomal proteins of colorectal cancer cells
112886141
Exosomal proteins of bladder cancer cells
112886141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
112886141
NCBI-ProteinID:
XP_025807719
LinkDB
All DBs
Position
3:31217456..31221756
Genome browser
AA seq
577 aa
AA seq
DB search
MASANAISTASLLRPLSQGRARRARNGRLQRFVVRADAKDIAFDQKSRAALQAGVEKLAN
AVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAG
DGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIQELENRARPVKGGGDIKA
VAAISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVT
NLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVVNK
LRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVTIH
QTTTTLIADAASKDEIQARVAQLKKELAETDSIYDTEKLAERIAKLAGGVAVIKVGAATE
TELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTIVPSIKEKIEDPDERLGADIIQ
KALVAPASLIAHNAGVEGEVVVEKVKESEWEVGYNAMTDKYENLIESGVIDPAKVTRCAL
QNAASVSGMVLTTQAIVVEKPKPKPQVADPAEGTLTV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccaacgccatctccaccgcctccctcctccggcccctctctcagggcagg
gcgaggagggccaggaacggccggttgcagcggttcgtagtccgtgccgacgccaaggac
atcgccttcgaccagaagtccagagcggcgctccaggccggcgtcgagaagctcgccaac
gccgtcggtgtcaccctcggtccccgaggaaggaatgtagtgctggatgagtatggcagc
cccaaagttgtaaatgatggagtaactattgcccgggctattgagctgtatgatccaatg
gaaaatgctggtgcagcactaattcgtgaggttgctagcaagaccaatgattctgctggt
gatgggactacaactgcttctgtccttgctcgtgaaattatcaagctaggccttctgagt
gtaacgtctggtgcaaaccctgtgtcacttaagaagggaattgacaaaactgtgcagggt
ctaattcaggagcttgagaatagggctagaccagtcaagggtggtggtgatatcaaagct
gttgcagctatctctgctggcaatgatgaattcatcggatccatgattgccgaagcaatt
gacaaagtgggccctgatggtgtcctttcaattgagtcttcatcatcctttgagactact
gttgatgttgaagaaggaatggagattgaccgtggatatatttccccacaatttgttacc
aacctcgagaaatctattgtggagtttgagaatgctaaggttcttattactgatcagaag
atcacaagcataaaggaaatccttccaattttggagaagaccacacagctgagagcccca
ctgttcattatcgctgaggacattactggtgaagctttggcaactcttgttgttaacaag
cttcgaggaatccttaacgttgcagcaattaaggccccaagctttggtgagcggcggaag
gctgtccttcaggacattgccattgtcacaggtgctgagttcctagcaaaagatcttggt
ttgttggttgaaaatgctacagaggaacaacttgggacagcaaggaaagtcacgatacat
cagaccacaaccaccctgatagcagatgcagccagtaaagatgagatccaagcgagggtt
gcacagctaaagaaggagcttgctgaaactgattcaatttatgatactgagaaattggct
gagagaattgcgaaacttgctggtggtgttgctgttatcaaggttggagctgcaactgaa
actgagcttgaggaccgccagctacgaattgaggatgcaaagaatgccacttttgccgct
atcgaggagggcattgttcctggaggtggtacggcatatgtgcacttatccaccattgtc
ccctcgatcaaggaaaaaattgaggatcctgatgagcgccttggtgctgacattattcaa
aaggcattggtggcacctgcttcactgatcgcgcacaatgctggagtggagggtgaagtg
gttgttgagaaggtcaaggagagtgagtgggaagtgggctacaatgcaatgacagacaag
tacgagaacctgattgagtcaggtgtgatcgaccctgccaaggtaactaggtgtgcgctc
cagaatgcggcctcagtgtcggggatggtcctaaccacacaggccattgttgtcgagaag
ccaaagccgaagcctcaagtggctgatcccgcggagggcacccttactgtgtaa
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