Panicum hallii (Hall's panicgrass): 112886158
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Entry
112886158 CDS
T07366
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112886158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112886158
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112886158
Membrane trafficking [BR:
phai04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112886158
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112886158
Exosomal proteins of other body fluids (saliva and urine)
112886158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
Ribosomal_L19e
Baculo_p24
DUF2383
Fusion_gly
DUF6688
APC_N_CC
SMIM5_18_22
MCPsignal
DUF2779
DUF745
Motif
Other DBs
NCBI-GeneID:
112886158
NCBI-ProteinID:
XP_025807744
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All DBs
Position
3:58696817..58700303
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AA seq
307 aa
AA seq
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MRNLLTDSFELGKREQVPGNVDIELGLQGDLTSSAQPGFEGFFEQVKDIENLLNTLTKLL
KDLQSSNEESKVVTKASAMKEVKKRMEKDVNEVTKVARLAKSKVEQLNKDNAANRQKPGF
GKGSGVDRSRTTTTVALTKRLRERILEFQTLREEIQKEYRDVVERRVFTVTGERANEETI
DKLIETGDGEQIFQRAIQEQGRGRVLDTLQEIQERHDAVKEIEKKLLDLQQIFLDLAVLV
EAQGEMLDNIETQVTGAAEHIQTGTNLLQKAKKLQKNTRKWTCIAIIILLIIVLVVILSL
KPWSWGK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaccttctcacggactcgtttgagctcggcaagagggagcaggtccctggaaat
gtcgacatcgagctcgggttgcagggtgacttgacaagttctgcgcagcctggtttcgag
ggcttctttgaacaggtcaaggatatcgaaaacctgctcaataccttgacaaagctactg
aaggaccttcagagctcaaatgaggagtccaaagttgtcacaaaggcatctgcgatgaaa
gaggttaaaaagcgcatggagaaggatgtcaatgaagtgacgaaggttgcacgtctggca
aaatcaaaagtagagcaactgaacaaagataatgctgcaaacagacaaaagccaggattt
ggcaagggatcaggtgtggaccgatcccggacaacaacaactgttgctttgacaaagagg
ttgagagaacgtatattggagtttcagacattaagagaagaaattcagaaggaataccgt
gatgtagtggagcgccgtgttttcactgttactggcgagcgtgctaatgaagagactatc
gataagctgatagaaacaggcgacggcgagcagatctttcagagagcaattcaggagcaa
gggcgaggaagggtgctggacacactgcaggagatccaggagcgacacgatgcagtgaaa
gagattgagaagaagcttcttgatctgcagcagattttcctcgacttggctgtcttggtc
gaagctcaaggagagatgctggacaacattgagacacaggtcacaggcgcagctgagcat
attcagaccggaacaaaccttctccagaaagcgaagaagctgcagaagaacacacgaaaa
tggacctgcatagcgataatcatcctcctgataatcgtgcttgtcgtcatcctctcccta
aaaccgtggtcatgggggaagtag
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