Panicum hallii (Hall's panicgrass): 112886416
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Entry
112886416 CDS
T07366
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112886416
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112886416
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phai04040
]
112886416
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112886416
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112886416
Ion channels [BR:
phai04040
]
Chloride channels
Chloride channel (CLC)
112886416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
SpoVAB
Motif
Other DBs
NCBI-GeneID:
112886416
NCBI-ProteinID:
XP_025808104
LinkDB
All DBs
Position
1:complement(47175051..47182269)
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AA seq
805 aa
AA seq
DB search
MDGGSPRPPRRPEREGSYNHDIESMDGSGAGGGPPWRSQNGSSEALLRYDDGGSAREPLL
RKRTMNTTSQIAIVGANVCPIESLDYEVVENDLFKQDWRSRKKKQIFQYIVLKWSLVLLI
GLLTGLVGFFNNLAVENIAGLKLLLTSRLMLNESYFKAFFVYGGCNLVLAASAAAICAYV
APAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACI
ANLLGQGGSRKYHLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAAS
WWRSALLWRTFFTTAVVAVVLRGLIEFCRSGKCGLFGQGGLIMFDLSSTVATYSTPDLIA
IIVLGIIGGIFGGLFNFLLDKILRVYSIINERGAPFKILLTITISIITSMCSYGLPWLAA
CTPCPVDAVEQCPTIGRSGNYKNFQCPQGYYNDLASLFFNTNDDAIRNLFSNGTANEFRM
SSLFIFFTAIYCLGLVTYGVAVPSGLFIPVILAGATYGRIVGTLLGSISDLDPGLFALLG
AASFLGGTMRMTVSVCVILLELTNDLPMLPLVMLVLLISKTIADNFNKGVYDQIVVMKGL
PYMEAHAEPYMRHLVAGDVVSGPLITFSGVEKVGNIVHALRITGHNGFPVVDEPPITETP
ELVGLVTRSHLLVLLNSKNFMKGRVKTSGSFVLRRFGAFDFAKPGSGKGLKIEDLDFTDE
EMDMYVDLHPITNTSPYTVVETMSLAKAAILFRELGLRHLLVVPKTPDRPPIVGILTRHD
FMPEHIHSLFPNLNPHRYHSASMAG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctccccgcggccgccccgccgcccggagcgggaggggagctacaaccac
gacatcgagagcatggacggctccggggccgggggcgggccgccgtggcggtcgcagaac
ggctcctccgaggccctgctccgctacgacgacggcgggagcgcgcgcgagccgctgctg
cggaagcgcaccatgaacaccacatcccagatcgccatcgtcggcgccaacgtctgcccc
atcgagagcttggattacgaagttgtggagaacgaccttttcaagcaagattggcgatca
agaaagaagaagcagatatttcagtacattgttctcaagtggagcttggtgcttcttatt
ggcttgttaactggacttgttggcttcttcaacaacctcgctgttgaaaacattgctgga
ctcaagttgctactcacgagtcgtctgatgctcaatgagagttatttcaaagcatttttt
gtatatggaggttgcaatttagtcttggcggcatctgcagcagcaatctgtgcttatgtt
gcacctgctgctgctggatccggtattcctgaagttaaagcatatcttaacggggttgat
gcttattctatattggctcctagtacactcttcgttaagatatttggttcaatacttgga
gtttcagctggatttgtactaggaaaggaaggccctatggtacacacaggagcatgtatt
gccaacttgcttggtcagggaggatcacgcaagtatcatcttacatgcaactggctaaga
tactttaagaacgacagggataggagagacttaattacatgtggatctgcagctggagtg
gcagctgccttccgtgcacctgttggcggtgttctgtttgctcttgaagaagcagcatca
tggtggcgaagtgcacttttgtggagaacattctttacaactgctgttgttgctgtggta
ttgaggggactgattgaattctgtcgcagtggaaaatgtggtctctttgggcaaggtgga
ttgatcatgtttgatctcagttcaactgttgcaacctacagtactccagatctgattgca
atcatagtccttggtataattggtggcatctttggaggcctcttcaactttctcttggac
aagatcctgcgagtttacagtatcatcaatgagagaggtgctccattcaagatccttctc
accataacaatatcaataatcacatcaatgtgttcctatggtcttccttggcttgctgca
tgcactccatgcccagttgatgctgtggagcagtgtccaactattggccgttctggaaat
tacaaaaacttccaatgcccacaaggatattacaatgatcttgcatcactcttcttcaac
accaatgatgatgccatccgcaatctcttcagcaacggcaccgcaaatgagttccgaatg
tccagtcttttcattttcttcactgctatttactgccttggacttgtgacttacggggtt
gctgtcccctctggcctctttatccctgttattcttgctggagctacttatgggcgcata
gtgggaacacttcttggatctatatctgatcttgatccaggcctttttgcccttcttggt
gccgcatcttttctcggtggaacaatgagaatgactgtttcagtttgtgtgatccttcta
gagctcaccaatgatcttcccatgctccctttggtcatgcttgtacttctcatatccaag
accatagcagataacttcaacaagggggtttatgatcagatagtggtgatgaaaggtttg
ccatacatggaggctcatgctgaaccatacatgaggcatttggtcgctggtgatgtggtt
tctggcccactaatcaccttttcaggtgttgagaaggtggggaacattgttcatgcgttg
aggataacgggccacaatgggtttcccgtggttgatgagccgcctataacagaaacccca
gagctggttgggcttgtgactaggtctcatctactggttttactgaacagcaagaatttc
atgaaggggcgggtgaaaactagtggtagctttgttctgcgaagatttggtgcctttgac
tttgcaaagccagggtcagggaaaggtttgaaaattgaggacctggatttcactgatgag
gagatggacatgtatgtggatctccatccgattacaaacacctcaccttatacggtagtt
gagacaatgtcactggcgaaagccgcaattcttttccgggaactcgggttgaggcatctc
ttggttgtgcccaagacaccagacaggcctcccatagttggaattctgacaaggcatgat
ttcatgcctgaacacattcatagtctgttcccaaatctcaaccctcacaggtaccattca
gcgtctatggcaggttga
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